RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 HMOX1P09601 288 aa11.95□□□□□ -0.5
SUB1-209ENST00000511615 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
SUB1-209ENST00000511615 XPCQ01831 940 aaPredicted RBP11.95□□□□□ -0.5
SUB1-209ENST00000511615 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
SUB1-209ENST00000511615 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
SUB1-209ENST00000511615 TRPM3Q9HCF6 1732 aaPredicted RBP11.95□□□□□ -0.5
SUB1-209ENST00000511615 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
SUB1-209ENST00000511615 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
SUB1-209ENST00000511615 ARHGEF10O15013 1369 aa11.94□□□□□ -0.5
SUB1-209ENST00000511615 TOM1O60784 492 aa11.94□□□□□ -0.5
SUB1-209ENST00000511615 BECN1Q14457 450 aa11.94□□□□□ -0.5
SUB1-209ENST00000511615 IP6K1Q92551 441 aa11.94□□□□□ -0.5
SUB1-209ENST00000511615 SLIT3O75094 1523 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 FLT4P35916 1363 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 DEKP35659 375 aaKnown RBP11.93□□□□□ -0.5
SUB1-209ENST00000511615 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
SUB1-209ENST00000511615 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
SUB1-209ENST00000511615 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
SUB1-209ENST00000511615 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
SUB1-209ENST00000511615 TMEM57Q8N5G2 664 aa11.92□□□□□ -0.5
SUB1-209ENST00000511615 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
SUB1-209ENST00000511615 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
SUB1-209ENST00000511615 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
SUB1-209ENST00000511615 NFAT5O94916 1531 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 VAMP4O75379 141 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 HOXC9P31274 260 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
SUB1-209ENST00000511615 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
SUB1-209ENST00000511615 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
SUB1-209ENST00000511615 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 AMPHP49418 695 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
SUB1-209ENST00000511615 LRRC59Q96AG4 307 aaKnown RBP11.91□□□□□ -0.5
SUB1-209ENST00000511615 CPDO75976 1380 aa11.89□□□□□ -0.51
SUB1-209ENST00000511615 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
SUB1-209ENST00000511615 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
SUB1-209ENST00000511615 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
SUB1-209ENST00000511615 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
SUB1-209ENST00000511615 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
SUB1-209ENST00000511615 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 MED1Q15648 1581 aaPredicted RBP11.87□□□□□ -0.51
SUB1-209ENST00000511615 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 AHDC1Q5TGY3 1603 aaPredicted RBP11.87□□□□□ -0.51
SUB1-209ENST00000511615 KDRP35968 1356 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 SOX12O15370 315 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
SUB1-209ENST00000511615 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
SUB1-209ENST00000511615 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
SUB1-209ENST00000511615 EYA1Q99502 592 aa11.86□□□□□ -0.51
SUB1-209ENST00000511615 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
SUB1-209ENST00000511615 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
SUB1-209ENST00000511615 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
SUB1-209ENST00000511615 NUCB1Q02818 461 aa11.85□□□□□ -0.51
SUB1-209ENST00000511615 TBC1D32Q96NH3 1257 aa11.85□□□□□ -0.51
SUB1-209ENST00000511615 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
SUB1-209ENST00000511615 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
SUB1-209ENST00000511615 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 ABCC4O15439 1325 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 ABCC6O95255 1503 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 KIAA0232Q92628 1395 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 SEC24BO95487 1268 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
SUB1-209ENST00000511615 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
SUB1-209ENST00000511615 NCAPD2Q15021 1401 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 CHL1O00533 1208 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 ZC3H6P61129 1189 aaKnown RBP11.83□□□□□ -0.52
SUB1-209ENST00000511615 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 ROBO1Q9Y6N7 1651 aa11.83□□□□□ -0.52
SUB1-209ENST00000511615 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
SUB1-209ENST00000511615 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
SUB1-209ENST00000511615 RGPD1P0DJD0 1748 aa11.82□□□□□ -0.52
SUB1-209ENST00000511615 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 NBPF6Q5VWK0 638 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 NBPF4Q96M43 638 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 PTPRCP08575 1304 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 ERBB3P21860 1342 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
SUB1-209ENST00000511615 C22orf23Q9BZE7 217 aa11.81□□□□□ -0.52
SUB1-209ENST00000511615 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
SUB1-209ENST00000511615 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
SUB1-209ENST00000511615 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
SUB1-209ENST00000511615 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
SUB1-209ENST00000511615 ANKRD24Q8TF21 1146 aa11.8□□□□□ -0.52
SUB1-209ENST00000511615 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
SUB1-209ENST00000511615 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SUB1-209ENST00000511615 MFAP1P55081 439 aaKnown RBP11.78□□□□□ -0.52
SUB1-209ENST00000511615 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms