RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 TONSLQ96HA7 1378 aa11.01□□□□□ -0.65
SMAD1-210ENST00000511255 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
SMAD1-210ENST00000511255 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
SMAD1-210ENST00000511255 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
SMAD1-210ENST00000511255 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
SMAD1-210ENST00000511255 JCADQ9P266 1359 aa11□□□□□ -0.65
SMAD1-210ENST00000511255 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
SMAD1-210ENST00000511255 AHDC1Q5TGY3 1603 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-210ENST00000511255 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
SMAD1-210ENST00000511255 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
SMAD1-210ENST00000511255 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
SMAD1-210ENST00000511255 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
SMAD1-210ENST00000511255 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
SMAD1-210ENST00000511255 ROCK2O75116 1388 aaKnown RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 NPHP3Q7Z494 1330 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 NUTM2BA6NNL0 878 aaPredicted RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 NUTM2EB1AL46 878 aaPredicted RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 FOXO3O43524 673 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 MEX3CQ5U5Q3 659 aaKnown RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 NUTM2AQ8IVF1 878 aaPredicted RBP10.96□□□□□ -0.65
SMAD1-210ENST00000511255 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
SMAD1-210ENST00000511255 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
SMAD1-210ENST00000511255 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
SMAD1-210ENST00000511255 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
SMAD1-210ENST00000511255 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
SMAD1-210ENST00000511255 XPCQ01831 940 aaPredicted RBP10.95□□□□□ -0.66
SMAD1-210ENST00000511255 RABGEF1Q9UJ41 708 aa10.95□□□□□ -0.66
SMAD1-210ENST00000511255 FMN2Q9NZ56 1722 aa10.95□□□□□ -0.66
SMAD1-210ENST00000511255 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
SMAD1-210ENST00000511255 WASLO00401 505 aaPredicted RBP10.94□□□□□ -0.66
SMAD1-210ENST00000511255 PTPN5P54829 565 aa10.94□□□□□ -0.66
SMAD1-210ENST00000511255 PRSS12P56730 875 aa10.94□□□□□ -0.66
SMAD1-210ENST00000511255 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
SMAD1-210ENST00000511255 ARHGEF28Q8N1W1 1705 aaKnown RBP10.94□□□□□ -0.66
SMAD1-210ENST00000511255 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
SMAD1-210ENST00000511255 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
SMAD1-210ENST00000511255 CENPJQ9HC77 1338 aaPredicted RBP10.93□□□□□ -0.66
SMAD1-210ENST00000511255 NBPF8Q3BBV2 869 aa10.93□□□□□ -0.66
SMAD1-210ENST00000511255 PMFBP1Q8TBY8 1022 aa10.93□□□□□ -0.66
SMAD1-210ENST00000511255 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 PTGDRQ13258 359 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
SMAD1-210ENST00000511255 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
SMAD1-210ENST00000511255 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 PNPLA6Q8IY17 1366 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 KRT28Q7Z3Y7 464 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 SHPRHQ149N8 1683 aa10.91□□□□□ -0.66
SMAD1-210ENST00000511255 TULP4Q9NRJ4 1543 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 KIF1AQ12756 1690 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
SMAD1-210ENST00000511255 PSME1Q06323 249 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 TTC13Q8NBP0 860 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.66
SMAD1-210ENST00000511255 LRP6O75581 1613 aa10.9□□□□□ -0.66
SMAD1-210ENST00000511255 PRR36Q9H6K5 1346 aa10.89□□□□□ -0.67
SMAD1-210ENST00000511255 A0A0G2JS52 829 aa10.89□□□□□ -0.67
SMAD1-210ENST00000511255 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
SMAD1-210ENST00000511255 RGPD8O14715 1765 aaPredicted RBP10.89□□□□□ -0.67
SMAD1-210ENST00000511255 PXDNQ92626 1479 aa10.88□□□□□ -0.67
SMAD1-210ENST00000511255 ADAMTS2O95450 1211 aa10.88□□□□□ -0.67
SMAD1-210ENST00000511255 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 CLSPNQ9HAW4 1339 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
SMAD1-210ENST00000511255 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-210ENST00000511255 GPRASP1Q5JY77 1395 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 ATP7BP35670 1465 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 RALGAPBQ86X10 1494 aa10.87□□□□□ -0.67
SMAD1-210ENST00000511255 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
SMAD1-210ENST00000511255 QRICH2Q9H0J4 1663 aa10.86□□□□□ -0.67
SMAD1-210ENST00000511255 GPR37O15354 613 aa10.86□□□□□ -0.67
SMAD1-210ENST00000511255 PADI6Q6TGC4 694 aa10.86□□□□□ -0.67
SMAD1-210ENST00000511255 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
SMAD1-210ENST00000511255 RGS17Q9UGC6 210 aaPredicted RBP10.86□□□□□ -0.67
SMAD1-210ENST00000511255 EVC2Q86UK5 1308 aa10.85□□□□□ -0.67
SMAD1-210ENST00000511255 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
SMAD1-210ENST00000511255 ZNF772Q68DY9 489 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-210ENST00000511255 NGLY1Q96IV0 654 aa10.85□□□□□ -0.67
SMAD1-210ENST00000511255 AFF2P51816 1311 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 SMAPO00193 183 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 FCHSD2O94868 740 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 POTEAQ6S8J7 498 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMAD1-210ENST00000511255 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
SMAD1-210ENST00000511255 SBNO1A3KN83 1393 aa10.83□□□□□ -0.68
SMAD1-210ENST00000511255 ARHGEF10O15013 1369 aa10.83□□□□□ -0.68
SMAD1-210ENST00000511255 TATDN2Q93075 761 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms