RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
CAST-235ENST00000511097 RGPD2P0DJD1 1756 aa23.2■■□□□ 1.3
CAST-235ENST00000511097 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
CAST-235ENST00000511097 SBF2Q86WG5 1849 aa23.18■■□□□ 1.3
CAST-235ENST00000511097 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
CAST-235ENST00000511097 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
CAST-235ENST00000511097 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
CAST-235ENST00000511097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.35e-7■■■□□ 14.7
CAST-235ENST00000511097 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
CAST-235ENST00000511097 RGPD3A6NKT7 1758 aaPredicted RBP23.15■■□□□ 1.3
CAST-235ENST00000511097 RGPD4Q7Z3J3 1758 aa23.15■■□□□ 1.3
CAST-235ENST00000511097 NHSQ6T4R5 1651 aa23.14■■□□□ 1.29
CAST-235ENST00000511097 KCNQ2O43526 872 aa23.14■■□□□ 1.29
CAST-235ENST00000511097 MTHFSP49914 203 aa23.14■■□□□ 1.29
CAST-235ENST00000511097 ACSBG1Q96GR2 724 aa23.13■■□□□ 1.29
CAST-235ENST00000511097 SPG7Q9UQ90 795 aa23.13■■□□□ 1.29
CAST-235ENST00000511097 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
CAST-235ENST00000511097 IL13P35225 146 aa23.11■■□□□ 1.29
CAST-235ENST00000511097 RREB1Q92766 1687 aa23.1■■□□□ 1.29
CAST-235ENST00000511097 CYP27B1O15528 508 aa23.09■■□□□ 1.29
CAST-235ENST00000511097 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.29
CAST-235ENST00000511097 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
CAST-235ENST00000511097 KDRP35968 1356 aa23.08■■□□□ 1.28
CAST-235ENST00000511097 NKX1-1Q15270 411 aaPredicted RBP23.07■■□□□ 1.28
CAST-235ENST00000511097 PROM2Q8N271 834 aa23.07■■□□□ 1.28
CAST-235ENST00000511097 PRIM1P49642 420 aaKnown RBP23.06■■□□□ 1.28
CAST-235ENST00000511097 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
CAST-235ENST00000511097 DIAPH1O60610 1272 aaKnown RBP23.04■■□□□ 1.28
CAST-235ENST00000511097 AMOTQ4VCS5 1084 aa23.04■■□□□ 1.28
CAST-235ENST00000511097 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
CAST-235ENST00000511097 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
CAST-235ENST00000511097 NUP188Q5SRE5 1749 aa23.04■■□□□ 1.28
CAST-235ENST00000511097 R3HDM1Q15032 1099 aaKnown RBP23.02■■□□□ 1.28
CAST-235ENST00000511097 PLEKHO1Q53GL0 409 aaPredicted RBP23.02■■□□□ 1.28
CAST-235ENST00000511097 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
CAST-235ENST00000511097 PHKG2P15735 406 aa23.01■■□□□ 1.27
CAST-235ENST00000511097 AEBP1Q8IUX7 1158 aa23.01■■□□□ 1.27
CAST-235ENST00000511097 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
CAST-235ENST00000511097 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
CAST-235ENST00000511097 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
CAST-235ENST00000511097 BTAF1O14981 1849 aa23■■□□□ 1.27
CAST-235ENST00000511097 SLC27A3Q5K4L6 730 aa23■■□□□ 1.27
CAST-235ENST00000511097 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
CAST-235ENST00000511097 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
CAST-235ENST00000511097 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
CAST-235ENST00000511097 PPP2R1AP30153 589 aa22.98■■□□□ 1.27
CAST-235ENST00000511097 HMGB2P26583 209 aaKnown RBP22.95■■□□□ 1.26
CAST-235ENST00000511097 DCAF5Q96JK2 942 aa22.95■■□□□ 1.26
CAST-235ENST00000511097 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
CAST-235ENST00000511097 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
CAST-235ENST00000511097 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
CAST-235ENST00000511097 STK32BQ9NY57 414 aa22.94■■□□□ 1.26
CAST-235ENST00000511097 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
CAST-235ENST00000511097 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 SLC15A2Q16348 729 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 LRRC4BQ9NT99 713 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 TOGARAM1Q9Y4F4 1720 aa22.92■■□□□ 1.26
CAST-235ENST00000511097 HMOX1P09601 288 aa22.91■■□□□ 1.26
CAST-235ENST00000511097 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
CAST-235ENST00000511097 PIGBQ92521 554 aa22.91■■□□□ 1.26
CAST-235ENST00000511097 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
CAST-235ENST00000511097 KAT6BQ8WYB5 2073 aa22.9■■□□□ 1.26
CAST-235ENST00000511097 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
CAST-235ENST00000511097 PAPPAQ13219 1627 aa22.9■■□□□ 1.26
CAST-235ENST00000511097 PALLDQ8WX93 1383 aa22.9■■□□□ 1.26
CAST-235ENST00000511097 RALBP1Q15311 655 aa22.89■■□□□ 1.26
CAST-235ENST00000511097 LRP5O75197 1615 aa22.89■■□□□ 1.25
CAST-235ENST00000511097 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.25
CAST-235ENST00000511097 CCNL1Q9UK58 526 aaPredicted RBP22.89■■□□□ 1.25
CAST-235ENST00000511097 LY75O60449 1722 aa22.88■■□□□ 1.25
CAST-235ENST00000511097 SRCAPQ6ZRS2 3230 aa22.88■■□□□ 1.25
CAST-235ENST00000511097 KDM6AO15550 1401 aaPredicted RBP22.87■■□□□ 1.25
CAST-235ENST00000511097 AKT1S1Q96B36 256 aa22.86■■□□□ 1.25
CAST-235ENST00000511097 MTHFSDQ2M296 383 aaKnown RBP22.84■■□□□ 1.25
CAST-235ENST00000511097 ITGB4P16144 1822 aa22.84■■□□□ 1.25
CAST-235ENST00000511097 ZNF827Q17R98 1081 aa22.83■■□□□ 1.25
CAST-235ENST00000511097 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
CAST-235ENST00000511097 FCHSD2O94868 740 aa22.82■■□□□ 1.24
CAST-235ENST00000511097 CABP4P57796 275 aa22.82■■□□□ 1.24
CAST-235ENST00000511097 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
CAST-235ENST00000511097 ATG3Q9NT62 314 aa22.82■■□□□ 1.24
CAST-235ENST00000511097 ASAP1Q9ULH1 1129 aa22.82■■□□□ 1.24
CAST-235ENST00000511097 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
CAST-235ENST00000511097 KCNQ4P56696 695 aa22.81■■□□□ 1.24
CAST-235ENST00000511097 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
CAST-235ENST00000511097 SPON1Q9HCB6 807 aa22.81■■□□□ 1.24
CAST-235ENST00000511097 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
CAST-235ENST00000511097 SIK1P57059 783 aa22.8■■□□□ 1.24
CAST-235ENST00000511097 CASZ1Q86V15 1759 aa22.8■■□□□ 1.24
CAST-235ENST00000511097 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
CAST-235ENST00000511097 NFATC2IPQ8NCF5 419 aa22.78■■□□□ 1.24
CAST-235ENST00000511097 TFCP2L1Q9NZI6 479 aa22.78■■□□□ 1.24
CAST-235ENST00000511097 PDGFDQ9GZP0 370 aaPredicted RBP22.77■■□□□ 1.24
CAST-235ENST00000511097 MYBBP1AQ9BQG0 1328 aaKnown RBP22.77■■□□□ 1.24
CAST-235ENST00000511097 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
CAST-235ENST00000511097 SLC16A10Q8TF71 515 aa22.76■■□□□ 1.23
CAST-235ENST00000511097 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
CAST-235ENST00000511097 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms