RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 ACSBG1Q96GR2 724 aa19.95■□□□□ 0.78
COL12A1-210ENST00000511023 RGPD3A6NKT7 1758 aaPredicted RBP19.95■□□□□ 0.78
COL12A1-210ENST00000511023 RGPD4Q7Z3J3 1758 aa19.95■□□□□ 0.78
COL12A1-210ENST00000511023 NCAPD2Q15021 1401 aa19.94■□□□□ 0.78
COL12A1-210ENST00000511023 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
COL12A1-210ENST00000511023 ZCRB1Q8TBF4 217 aaKnown RBP19.94■□□□□ 0.78
COL12A1-210ENST00000511023 MORC1Q86VD1 984 aa19.93■□□□□ 0.78
COL12A1-210ENST00000511023 R3HDM1Q15032 1099 aaKnown RBP19.92■□□□□ 0.78
COL12A1-210ENST00000511023 PROM2Q8N271 834 aa19.92■□□□□ 0.78
COL12A1-210ENST00000511023 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
COL12A1-210ENST00000511023 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
COL12A1-210ENST00000511023 EYA1Q99502 592 aa19.91■□□□□ 0.78
COL12A1-210ENST00000511023 TATP17735 454 aaPredicted RBP19.9■□□□□ 0.78
COL12A1-210ENST00000511023 BTAF1O14981 1849 aa19.88■□□□□ 0.77
COL12A1-210ENST00000511023 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
COL12A1-210ENST00000511023 PKD1L3Q7Z443 1732 aa19.86■□□□□ 0.77
COL12A1-210ENST00000511023 TXNRD1Q16881 649 aa19.86■□□□□ 0.77
COL12A1-210ENST00000511023 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
COL12A1-210ENST00000511023 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
COL12A1-210ENST00000511023 CYP27B1O15528 508 aa19.84■□□□□ 0.77
COL12A1-210ENST00000511023 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
COL12A1-210ENST00000511023 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
COL12A1-210ENST00000511023 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
COL12A1-210ENST00000511023 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
COL12A1-210ENST00000511023 PCDH11XQ9BZA7 1347 aa19.83■□□□□ 0.77
COL12A1-210ENST00000511023 PCDH11YQ9BZA8 1340 aa19.83■□□□□ 0.77
COL12A1-210ENST00000511023 NPC1L1Q9UHC9 1359 aa19.82■□□□□ 0.76
COL12A1-210ENST00000511023 LRP5O75197 1615 aa19.81■□□□□ 0.76
COL12A1-210ENST00000511023 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
COL12A1-210ENST00000511023 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
COL12A1-210ENST00000511023 IL13P35225 146 aa19.79■□□□□ 0.76
COL12A1-210ENST00000511023 MTHFSP49914 203 aa19.79■□□□□ 0.76
COL12A1-210ENST00000511023 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
COL12A1-210ENST00000511023 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
COL12A1-210ENST00000511023 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
COL12A1-210ENST00000511023 AEBP1Q8IUX7 1158 aa19.78■□□□□ 0.76
COL12A1-210ENST00000511023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL12A1-210ENST00000511023 SPG7Q9UQ90 795 aa19.78■□□□□ 0.76
COL12A1-210ENST00000511023 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
COL12A1-210ENST00000511023 PDGFDQ9GZP0 370 aaPredicted RBP19.76■□□□□ 0.75
COL12A1-210ENST00000511023 LY75O60449 1722 aa19.75■□□□□ 0.75
COL12A1-210ENST00000511023 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
COL12A1-210ENST00000511023 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
COL12A1-210ENST00000511023 PHKG2P15735 406 aa19.74■□□□□ 0.75
COL12A1-210ENST00000511023 KCNQ4P56696 695 aa19.74■□□□□ 0.75
COL12A1-210ENST00000511023 SLC15A2Q16348 729 aa19.74■□□□□ 0.75
COL12A1-210ENST00000511023 ITGB4P16144 1822 aa19.74■□□□□ 0.75
COL12A1-210ENST00000511023 KDRP35968 1356 aa19.73■□□□□ 0.75
COL12A1-210ENST00000511023 SULT6B1Q6IMI4 303 aa19.73■□□□□ 0.75
COL12A1-210ENST00000511023 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
COL12A1-210ENST00000511023 ZNF827Q17R98 1081 aa19.72■□□□□ 0.75
COL12A1-210ENST00000511023 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
COL12A1-210ENST00000511023 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
COL12A1-210ENST00000511023 IFNL2Q8IZJ0 200 aa19.72■□□□□ 0.75
COL12A1-210ENST00000511023 COL3A1P02461 1466 aaPredicted RBP19.72■□□□□ 0.75
COL12A1-210ENST00000511023 PIGBQ92521 554 aa19.7■□□□□ 0.74
COL12A1-210ENST00000511023 PLEKHO1Q53GL0 409 aaPredicted RBP19.69■□□□□ 0.74
COL12A1-210ENST00000511023 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
COL12A1-210ENST00000511023 DIAPH1O60610 1272 aaKnown RBP19.68■□□□□ 0.74
COL12A1-210ENST00000511023 AMOTQ4VCS5 1084 aa19.67■□□□□ 0.74
COL12A1-210ENST00000511023 ZNF530Q6P9A1 599 aaPredicted RBP19.67■□□□□ 0.74
COL12A1-210ENST00000511023 CCNL1Q9UK58 526 aaPredicted RBP19.67■□□□□ 0.74
COL12A1-210ENST00000511023 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
COL12A1-210ENST00000511023 HMOX1P09601 288 aa19.66■□□□□ 0.74
COL12A1-210ENST00000511023 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
COL12A1-210ENST00000511023 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
COL12A1-210ENST00000511023 SPON1Q9HCB6 807 aa19.65■□□□□ 0.74
COL12A1-210ENST00000511023 PPP2R1AP30153 589 aa19.64■□□□□ 0.73
COL12A1-210ENST00000511023 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
COL12A1-210ENST00000511023 TUBGCP6Q96RT7 1819 aa19.64■□□□□ 0.73
COL12A1-210ENST00000511023 DCAF5Q96JK2 942 aa19.63■□□□□ 0.73
COL12A1-210ENST00000511023 ASAP1Q9ULH1 1129 aa19.63■□□□□ 0.73
COL12A1-210ENST00000511023 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
COL12A1-210ENST00000511023 HSP90AB1P08238 724 aaKnown RBP19.62■□□□□ 0.73
COL12A1-210ENST00000511023 SMARCC1Q92922 1105 aaPredicted RBP19.62■□□□□ 0.73
COL12A1-210ENST00000511023 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
COL12A1-210ENST00000511023 C5P01031 1676 aa19.62■□□□□ 0.73
COL12A1-210ENST00000511023 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
COL12A1-210ENST00000511023 TAF1LQ8IZX4 1826 aa19.61■□□□□ 0.73
COL12A1-210ENST00000511023 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
COL12A1-210ENST00000511023 PTGER2P43116 358 aa19.61■□□□□ 0.73
COL12A1-210ENST00000511023 ATG3Q9NT62 314 aa19.61■□□□□ 0.73
COL12A1-210ENST00000511023 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
COL12A1-210ENST00000511023 U2SURPO15042 1029 aaKnown RBP19.59■□□□□ 0.73
COL12A1-210ENST00000511023 TFCP2L1Q9NZI6 479 aa19.59■□□□□ 0.73
COL12A1-210ENST00000511023 LOC102724428A0A0B4J2F2 783 aa19.58■□□□□ 0.72
COL12A1-210ENST00000511023 SIK1P57059 783 aa19.58■□□□□ 0.72
COL12A1-210ENST00000511023 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
COL12A1-210ENST00000511023 SGIP1Q9BQI5 828 aa19.58■□□□□ 0.72
COL12A1-210ENST00000511023 MTFR1LQ9H019 292 aa19.58■□□□□ 0.72
COL12A1-210ENST00000511023 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
COL12A1-210ENST00000511023 SCN11AQ9UI33 1791 aa19.57■□□□□ 0.72
COL12A1-210ENST00000511023 CABP4P57796 275 aa19.56■□□□□ 0.72
COL12A1-210ENST00000511023 ITPK1Q13572 414 aa19.56■□□□□ 0.72
COL12A1-210ENST00000511023 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
COL12A1-210ENST00000511023 SLC4A9Q96Q91 983 aa19.56■□□□□ 0.72
COL12A1-210ENST00000511023 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
COL12A1-210ENST00000511023 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
COL12A1-210ENST00000511023 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
COL12A1-210ENST00000511023 LINC00116Q8NCU8 138 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms