RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
PDPN-209ENST00000510906 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
PDPN-209ENST00000510906 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
PDPN-209ENST00000510906 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
PDPN-209ENST00000510906 PLCH1Q4KWH8 1693 aa12.22□□□□□ -0.45
PDPN-209ENST00000510906 KIAA0232Q92628 1395 aa12.21□□□□□ -0.45
PDPN-209ENST00000510906 ZC3H6P61129 1189 aaKnown RBP12.21□□□□□ -0.45
PDPN-209ENST00000510906 CHRNA2Q15822 529 aa12.21□□□□□ -0.45
PDPN-209ENST00000510906 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.45
PDPN-209ENST00000510906 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.45
PDPN-209ENST00000510906 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
PDPN-209ENST00000510906 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
PDPN-209ENST00000510906 RBM26Q5T8P6 1007 aaKnown RBP12.2□□□□□ -0.46
PDPN-209ENST00000510906 CEP350Q5VT06 3117 aa12.2□□□□□ -0.46
PDPN-209ENST00000510906 EP400Q96L91 3159 aa12.2□□□□□ -0.46
PDPN-209ENST00000510906 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
PDPN-209ENST00000510906 USP6P35125 1406 aa12.2□□□□□ -0.46
PDPN-209ENST00000510906 USP19O94966 1318 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 SLC39A7Q92504 469 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
PDPN-209ENST00000510906 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
PDPN-209ENST00000510906 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
PDPN-209ENST00000510906 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
PDPN-209ENST00000510906 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
PDPN-209ENST00000510906 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
PDPN-209ENST00000510906 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
PDPN-209ENST00000510906 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
PDPN-209ENST00000510906 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
PDPN-209ENST00000510906 SEC24BO95487 1268 aa12.17□□□□□ -0.46
PDPN-209ENST00000510906 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
PDPN-209ENST00000510906 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
PDPN-209ENST00000510906 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 A0A0G2JS52 829 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 GCP02774 474 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 MYT1Q01538 1121 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 STRN4Q9NRL3 753 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
PDPN-209ENST00000510906 C7P10643 843 aa12.15□□□□□ -0.46
PDPN-209ENST00000510906 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
PDPN-209ENST00000510906 CPDO75976 1380 aa12.15□□□□□ -0.46
PDPN-209ENST00000510906 TTC21BQ7Z4L5 1316 aa12.14□□□□□ -0.47
PDPN-209ENST00000510906 CPSF1Q10570 1443 aaKnown RBP12.14□□□□□ -0.47
PDPN-209ENST00000510906 POTEHQ6S545 545 aa12.14□□□□□ -0.47
PDPN-209ENST00000510906 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
PDPN-209ENST00000510906 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
PDPN-209ENST00000510906 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
PDPN-209ENST00000510906 ZBTB7CA1YPR0 619 aa12.13□□□□□ -0.47
PDPN-209ENST00000510906 TESK2Q96S53 571 aa12.13□□□□□ -0.47
PDPN-209ENST00000510906 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
PDPN-209ENST00000510906 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
PDPN-209ENST00000510906 SLIT3O75094 1523 aa12.12□□□□□ -0.47
PDPN-209ENST00000510906 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
PDPN-209ENST00000510906 EVA1CP58658 441 aa12.12□□□□□ -0.47
PDPN-209ENST00000510906 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
PDPN-209ENST00000510906 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
PDPN-209ENST00000510906 TTC21AQ8NDW8 1320 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 CD163L1Q9NR16 1453 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
PDPN-209ENST00000510906 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
PDPN-209ENST00000510906 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
PDPN-209ENST00000510906 GPR37O15354 613 aa12.1□□□□□ -0.47
PDPN-209ENST00000510906 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
PDPN-209ENST00000510906 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
PDPN-209ENST00000510906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDPN-209ENST00000510906 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
PDPN-209ENST00000510906 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
PDPN-209ENST00000510906 PTGER2P43116 358 aa12.09□□□□□ -0.47
PDPN-209ENST00000510906 THSD7AQ9UPZ6 1657 aa12.09□□□□□ -0.47
PDPN-209ENST00000510906 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
PDPN-209ENST00000510906 USP47Q96K76 1375 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 HDGFL2Q7Z4V5 671 aaPredicted RBP12.08□□□□□ -0.48
PDPN-209ENST00000510906 DEFB132Q7Z7B7 95 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 ARHGEF25Q86VW2 580 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 NME9Q86XW9 330 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
PDPN-209ENST00000510906 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
PDPN-209ENST00000510906 A0A1W2PP64 1363 aa12.07□□□□□ -0.48
PDPN-209ENST00000510906 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
PDPN-209ENST00000510906 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
PDPN-209ENST00000510906 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
PDPN-209ENST00000510906 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 SF3B2Q13435 895 aaKnown RBP12.06□□□□□ -0.48
PDPN-209ENST00000510906 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 TIMELESSQ9UNS1 1208 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
PDPN-209ENST00000510906 CRB1P82279 1406 aa12.05□□□□□ -0.48
PDPN-209ENST00000510906 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms