RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 NPHP3Q7Z494 1330 aa8.6□□□□□ -1.03
KDM3B-207ENST00000510866 TTC21BQ7Z4L5 1316 aa8.6□□□□□ -1.03
KDM3B-207ENST00000510866 GOLGA6L1Q8N7Z2 621 aa8.6□□□□□ -1.03
KDM3B-207ENST00000510866 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
KDM3B-207ENST00000510866 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
KDM3B-207ENST00000510866 LARP1Q6PKG0 1096 aaKnown RBP8.59□□□□□ -1.03
KDM3B-207ENST00000510866 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
KDM3B-207ENST00000510866 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
KDM3B-207ENST00000510866 RPGRQ92834 1020 aaKnown RBP8.59□□□□□ -1.03
KDM3B-207ENST00000510866 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.03
KDM3B-207ENST00000510866 MVPQ14764 893 aaKnown RBP8.59□□□□□ -1.03
KDM3B-207ENST00000510866 LRP2BPQ9P2M1 347 aa8.59□□□□□ -1.03
KDM3B-207ENST00000510866 ZNF219Q9P2Y4 722 aaPredicted RBP8.59□□□□□ -1.03
KDM3B-207ENST00000510866 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.04
KDM3B-207ENST00000510866 ANKRD20A12PQ8NF67 263 aa8.59□□□□□ -1.04
KDM3B-207ENST00000510866 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-207ENST00000510866 LMTK3Q96Q04 1460 aa8.58□□□□□ -1.04
KDM3B-207ENST00000510866 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
KDM3B-207ENST00000510866 TRMT112Q9UI30 125 aaKnown RBP8.58□□□□□ -1.04
KDM3B-207ENST00000510866 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-207ENST00000510866 PPIP5K1Q6PFW1 1433 aa8.58□□□□□ -1.04
KDM3B-207ENST00000510866 ZMYM3Q14202 1370 aa8.58□□□□□ -1.04
KDM3B-207ENST00000510866 TMOD2Q9NZR1 351 aa8.58□□□□□ -1.04
KDM3B-207ENST00000510866 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
KDM3B-207ENST00000510866 RPRD2Q5VT52 1461 aaKnown RBP8.57□□□□□ -1.04
KDM3B-207ENST00000510866 TDO2P48775 406 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 NSD2O96028 1365 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 CAVIN4Q5BKX8 364 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 IL1RAPL2Q9NP60 686 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 CCDC73Q6ZRK6 1079 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 DISP3Q9P2K9 1392 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 IDH1O75874 414 aaKnown RBP8.57□□□□□ -1.04
KDM3B-207ENST00000510866 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
KDM3B-207ENST00000510866 TTC21AQ8NDW8 1320 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 ATP2B1P20020 1258 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 GPTP24298 496 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 CCDC184Q52MB2 194 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 RFC4P35249 363 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 TEX13AQ9BXU3 409 aaPredicted RBP8.56□□□□□ -1.04
KDM3B-207ENST00000510866 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 AKAP2Q9Y2D5 859 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 NUCB2P80303 420 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 SLFN5Q08AF3 891 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 R3HCC1Q9Y3T6 440 aaKnown RBP8.56□□□□□ -1.04
KDM3B-207ENST00000510866 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
KDM3B-207ENST00000510866 UHRF1BP1Q6BDS2 1440 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 ZCRB1Q8TBF4 217 aaKnown RBP8.55□□□□□ -1.04
KDM3B-207ENST00000510866 CDK5RAP3Q96JB5 506 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 CHMP5Q9NZZ3 219 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 MPHOSPH10O00566 681 aaKnown RBP8.55□□□□□ -1.04
KDM3B-207ENST00000510866 IFIT1P09914 478 aaKnown RBP8.55□□□□□ -1.04
KDM3B-207ENST00000510866 IFIT5Q13325 482 aaKnown RBP8.55□□□□□ -1.04
KDM3B-207ENST00000510866 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 ABCC11Q96J66 1382 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 NUP160Q12769 1436 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 NEK4P51957 841 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 C19orf44Q9H6X5 657 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 ANKRD36BQ8N2N9 1353 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 SASS6Q6UVJ0 657 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
KDM3B-207ENST00000510866 STK3Q13188 491 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
KDM3B-207ENST00000510866 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 A0A087WZG4 1122 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 ANKRD18BA2A2Z9 1011 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 FBLN1P23142 703 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
KDM3B-207ENST00000510866 ATP10AO60312 1499 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 USP5P45974 858 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
KDM3B-207ENST00000510866 DNAAF4Q8WXU2 420 aa8.54□□□□□ -1.04
KDM3B-207ENST00000510866 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
KDM3B-207ENST00000510866 CWC27Q6UX04 472 aaKnown RBP8.53□□□□□ -1.04
KDM3B-207ENST00000510866 ZNF622Q969S3 477 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■■■□□ 15.4
KDM3B-207ENST00000510866 F6X3S4 739 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 SLC5A1P13866 664 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 ATP6V1AP38606 617 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 EPS15P42566 896 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 ST5P78524 1137 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 DDB1Q16531 1140 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 WWC2Q6AWC2 1192 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 DZIP1Q86YF9 867 aaKnown RBP8.53□□□□□ -1.04
KDM3B-207ENST00000510866 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 TRIM22Q8IYM9 498 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 MAP3K2Q9Y2U5 619 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 FANCIQ9NVI1 1328 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
KDM3B-207ENST00000510866 IPO7O95373 1038 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms