RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 TSR3Q9UJK0 312 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 AFF2P51816 1311 aa9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 SMAPO00193 183 aa9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 LRPPRCP42704 1394 aaKnown RBP9.23□□□□□ -0.93
SH3RF1-204ENST00000510806 IFT172Q9UG01 1749 aa9.22□□□□□ -0.93
SH3RF1-204ENST00000510806 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
SH3RF1-204ENST00000510806 C14orf93Q9H972 538 aaKnown RBP9.22□□□□□ -0.93
SH3RF1-204ENST00000510806 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
SH3RF1-204ENST00000510806 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.93
SH3RF1-204ENST00000510806 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.93
SH3RF1-204ENST00000510806 OSBPP22059 807 aa9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 PRSS12P56730 875 aa9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 PAXIP1Q6ZW49 1069 aaPredicted RBP9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 WAPLQ7Z5K2 1190 aa9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 PACS2Q86VP3 889 aa9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 FNBP4Q8N3X1 1017 aaPredicted RBP9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 QTRT2Q9H974 415 aaKnown RBP9.21□□□□□ -0.94
SH3RF1-204ENST00000510806 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 KCNC4Q03721 635 aa9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 TMEM132EQ6IEE7 984 aa9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 COL22A1Q8NFW1 1626 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-204ENST00000510806 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 C8orf37Q96NL8 207 aa9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 NPHP3Q7Z494 1330 aa9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 YTHDC2Q9H6S0 1430 aaKnown RBP9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 PXDNQ92626 1479 aa9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
SH3RF1-204ENST00000510806 FOXO3O43524 673 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 HRCP23327 699 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 MYOM2P54296 1465 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 STK26Q9P289 416 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 PLEKHH1Q9ULM0 1364 aa9.18□□□□□ -0.94
SH3RF1-204ENST00000510806 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
SH3RF1-204ENST00000510806 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 RAB3GAP2Q9H2M9 1393 aa9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 TATDN2Q93075 761 aa9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 USP21Q9UK80 565 aa9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 TRPC5Q9UL62 973 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-204ENST00000510806 RGS12O14924 1447 aa9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 ATRNO75882 1429 aa9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 DHX57Q6P158 1386 aaKnown RBP9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 SPATA31A3Q5VYP0 1347 aa9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 FMN2Q9NZ56 1722 aa9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 TJAP1Q5JTD0 557 aa9.15□□□□□ -0.94
SH3RF1-204ENST00000510806 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
SH3RF1-204ENST00000510806 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
SH3RF1-204ENST00000510806 DLC1Q96QB1 1528 aa9.14□□□□□ -0.95
SH3RF1-204ENST00000510806 ADGRB1O14514 1584 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 PPP4CP60510 307 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 MARF1Q9Y4F3 1742 aaKnown RBP9.13□□□□□ -0.95
SH3RF1-204ENST00000510806 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 GJD4Q96KN9 370 aaPredicted RBP9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 PRAM1Q96QH2 718 aa9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 RBM27Q9P2N5 1060 aaKnown RBP9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 KIF1AQ12756 1690 aa9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
SH3RF1-204ENST00000510806 SLIT2O94813 1529 aa9.11□□□□□ -0.95
SH3RF1-204ENST00000510806 PSME1Q06323 249 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 UNC5CLQ8IV45 518 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 MTRQ99707 1265 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 ANKARQ7Z5J8 1434 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
SH3RF1-204ENST00000510806 USP32Q8NFA0 1604 aa9.09□□□□□ -0.95
SH3RF1-204ENST00000510806 ADGRB2O60241 1585 aa9.09□□□□□ -0.95
SH3RF1-204ENST00000510806 APLP1P51693 650 aa9.09□□□□□ -0.95
SH3RF1-204ENST00000510806 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
SH3RF1-204ENST00000510806 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
SH3RF1-204ENST00000510806 TNS3Q68CZ2 1445 aa9.08□□□□□ -0.96
SH3RF1-204ENST00000510806 POGKQ9P215 609 aa9.08□□□□□ -0.96
SH3RF1-204ENST00000510806 PRR36Q9H6K5 1346 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 LCE2BO14633 110 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 SAFB2Q14151 953 aaKnown RBP eCLIP9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 VPS72Q15906 364 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 GLI3P10071 1580 aa9.07□□□□□ -0.96
SH3RF1-204ENST00000510806 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms