RNA–Protein interactions for RNA: ENST00000510658.5

SNCAIP-215, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-215ENST00000510658 AAMPQ13685 434 aa17.72■□□□□ 0.43
SNCAIP-215ENST00000510658 RGS3P49796 1198 aa17.72■□□□□ 0.43
SNCAIP-215ENST00000510658 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
SNCAIP-215ENST00000510658 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
SNCAIP-215ENST00000510658 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.42
SNCAIP-215ENST00000510658 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.42
SNCAIP-215ENST00000510658 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
SNCAIP-215ENST00000510658 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
SNCAIP-215ENST00000510658 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
SNCAIP-215ENST00000510658 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
SNCAIP-215ENST00000510658 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
SNCAIP-215ENST00000510658 SLIT3O75094 1523 aa17.68■□□□□ 0.42
SNCAIP-215ENST00000510658 USP19O94966 1318 aa17.68■□□□□ 0.42
SNCAIP-215ENST00000510658 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
SNCAIP-215ENST00000510658 MSH5O43196 834 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 TSPYL4Q9UJ04 414 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 DCCP43146 1447 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 MSH6P52701 1360 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
SNCAIP-215ENST00000510658 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
SNCAIP-215ENST00000510658 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
SNCAIP-215ENST00000510658 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
SNCAIP-215ENST00000510658 ZBTB40Q9NUA8 1239 aa17.66■□□□□ 0.42
SNCAIP-215ENST00000510658 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-215ENST00000510658 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
SNCAIP-215ENST00000510658 MAP3K5Q99683 1374 aa17.65■□□□□ 0.42
SNCAIP-215ENST00000510658 HTATSF1O43719 755 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-215ENST00000510658 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-215ENST00000510658 PHRF1Q9P1Y6 1649 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-215ENST00000510658 RGPD2P0DJD1 1756 aa17.64■□□□□ 0.41
SNCAIP-215ENST00000510658 STRCQ7RTU9 1775 aa17.64■□□□□ 0.41
SNCAIP-215ENST00000510658 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
SNCAIP-215ENST00000510658 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-215ENST00000510658 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
SNCAIP-215ENST00000510658 MED1Q15648 1581 aaPredicted RBP17.62■□□□□ 0.41
SNCAIP-215ENST00000510658 ABCC4O15439 1325 aa17.62■□□□□ 0.41
SNCAIP-215ENST00000510658 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 NPHP3Q7Z494 1330 aa17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-215ENST00000510658 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-215ENST00000510658 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
SNCAIP-215ENST00000510658 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
SNCAIP-215ENST00000510658 C8orf34Q49A92 452 aa17.6■□□□□ 0.41
SNCAIP-215ENST00000510658 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-215ENST00000510658 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
SNCAIP-215ENST00000510658 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
SNCAIP-215ENST00000510658 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
SNCAIP-215ENST00000510658 SLC4A2P04920 1241 aa17.58■□□□□ 0.41
SNCAIP-215ENST00000510658 TAF7Q15545 349 aaPredicted RBP17.58■□□□□ 0.41
SNCAIP-215ENST00000510658 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
SNCAIP-215ENST00000510658 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
SNCAIP-215ENST00000510658 RGS12O14924 1447 aa17.57■□□□□ 0.4
SNCAIP-215ENST00000510658 PXDNQ92626 1479 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 ERBB3P21860 1342 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 CEMIPQ8WUJ3 1361 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
SNCAIP-215ENST00000510658 G2E3Q7L622 706 aa17.55■□□□□ 0.4
SNCAIP-215ENST00000510658 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
SNCAIP-215ENST00000510658 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
SNCAIP-215ENST00000510658 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
SNCAIP-215ENST00000510658 CHRNA2Q15822 529 aa17.54■□□□□ 0.4
SNCAIP-215ENST00000510658 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
SNCAIP-215ENST00000510658 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
SNCAIP-215ENST00000510658 SMC5Q8IY18 1101 aa17.53■□□□□ 0.4
SNCAIP-215ENST00000510658 PTPRCP08575 1304 aa17.53■□□□□ 0.4
SNCAIP-215ENST00000510658 AMOTQ4VCS5 1084 aa17.53■□□□□ 0.4
SNCAIP-215ENST00000510658 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-215ENST00000510658 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
SNCAIP-215ENST00000510658 CHMP4BQ9H444 224 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-215ENST00000510658 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.39
SNCAIP-215ENST00000510658 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.39
SNCAIP-215ENST00000510658 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.39
SNCAIP-215ENST00000510658 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-215ENST00000510658 F6X3S4 739 aa17.51■□□□□ 0.39
SNCAIP-215ENST00000510658 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
SNCAIP-215ENST00000510658 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
SNCAIP-215ENST00000510658 KCNQ3O43525 872 aa17.5■□□□□ 0.39
SNCAIP-215ENST00000510658 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
SNCAIP-215ENST00000510658 RNMTO43148 476 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-215ENST00000510658 TEFQ10587 303 aa17.49■□□□□ 0.39
SNCAIP-215ENST00000510658 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
SNCAIP-215ENST00000510658 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
SNCAIP-215ENST00000510658 CSB-PGBD3P0DP91 1061 aa17.48■□□□□ 0.39
SNCAIP-215ENST00000510658 COL18A1P39060 1754 aa17.48■□□□□ 0.39
SNCAIP-215ENST00000510658 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
SNCAIP-215ENST00000510658 BTBD11A6QL63 1104 aa17.47■□□□□ 0.39
SNCAIP-215ENST00000510658 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-215ENST00000510658 FLIIQ13045 1269 aa17.47■□□□□ 0.39
SNCAIP-215ENST00000510658 NUCB1Q02818 461 aa17.46■□□□□ 0.39
SNCAIP-215ENST00000510658 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
SNCAIP-215ENST00000510658 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
SNCAIP-215ENST00000510658 MEIS3Q99687 375 aa17.46■□□□□ 0.39
SNCAIP-215ENST00000510658 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms