RNA–Protein interactions for RNA: ENST00000510598.5

LEMD2-208, Transcript of LEM domain containing 2, humanhuman

TSL 1 (best)

Gene LEMD2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-208ENST00000510598 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
LEMD2-208ENST00000510598 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
LEMD2-208ENST00000510598 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
LEMD2-208ENST00000510598 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
LEMD2-208ENST00000510598 RTL1A6NKG5 1358 aa12.8□□□□□ -0.36
LEMD2-208ENST00000510598 ADCY9O60503 1353 aa12.8□□□□□ -0.36
LEMD2-208ENST00000510598 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
LEMD2-208ENST00000510598 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
LEMD2-208ENST00000510598 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
LEMD2-208ENST00000510598 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
LEMD2-208ENST00000510598 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
LEMD2-208ENST00000510598 TERF2IPQ9NYB0 399 aa12.79□□□□□ -0.36
LEMD2-208ENST00000510598 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
LEMD2-208ENST00000510598 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
LEMD2-208ENST00000510598 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
LEMD2-208ENST00000510598 C4BP0C0L5 1744 aa12.77□□□□□ -0.36
LEMD2-208ENST00000510598 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.37
LEMD2-208ENST00000510598 HOXC9P31274 260 aa12.77□□□□□ -0.37
LEMD2-208ENST00000510598 KCNQ4P56696 695 aa12.77□□□□□ -0.37
LEMD2-208ENST00000510598 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
LEMD2-208ENST00000510598 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
LEMD2-208ENST00000510598 CGNL1Q0VF96 1302 aa12.77□□□□□ -0.37
LEMD2-208ENST00000510598 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
LEMD2-208ENST00000510598 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
LEMD2-208ENST00000510598 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
LEMD2-208ENST00000510598 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
LEMD2-208ENST00000510598 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
LEMD2-208ENST00000510598 USP47Q96K76 1375 aa12.76□□□□□ -0.37
LEMD2-208ENST00000510598 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
LEMD2-208ENST00000510598 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
LEMD2-208ENST00000510598 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
LEMD2-208ENST00000510598 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
LEMD2-208ENST00000510598 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
LEMD2-208ENST00000510598 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
LEMD2-208ENST00000510598 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
LEMD2-208ENST00000510598 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
LEMD2-208ENST00000510598 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
LEMD2-208ENST00000510598 COG3Q96JB2 828 aa12.73□□□□□ -0.37
LEMD2-208ENST00000510598 KIAA1551Q9HCM1 1747 aa12.73□□□□□ -0.37
LEMD2-208ENST00000510598 TESK2Q96S53 571 aa12.72□□□□□ -0.37
LEMD2-208ENST00000510598 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 AMPHP49418 695 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 NBPF6Q5VWK0 638 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 NBPF4Q96M43 638 aa12.71□□□□□ -0.37
LEMD2-208ENST00000510598 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
LEMD2-208ENST00000510598 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
LEMD2-208ENST00000510598 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
LEMD2-208ENST00000510598 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
LEMD2-208ENST00000510598 HSPA6P17066 643 aa12.7□□□□□ -0.38
LEMD2-208ENST00000510598 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
LEMD2-208ENST00000510598 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
LEMD2-208ENST00000510598 INSRP06213 1382 aa12.69□□□□□ -0.38
LEMD2-208ENST00000510598 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
LEMD2-208ENST00000510598 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
LEMD2-208ENST00000510598 MSH5O43196 834 aa12.68□□□□□ -0.38
LEMD2-208ENST00000510598 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
LEMD2-208ENST00000510598 FBLN1P23142 703 aa12.68□□□□□ -0.38
LEMD2-208ENST00000510598 RAPGEF4Q8WZA2 1011 aa12.68□□□□□ -0.38
LEMD2-208ENST00000510598 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
LEMD2-208ENST00000510598 FLT4P35916 1363 aa12.67□□□□□ -0.38
LEMD2-208ENST00000510598 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
LEMD2-208ENST00000510598 FYB1O15117 783 aa12.66□□□□□ -0.38
LEMD2-208ENST00000510598 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
LEMD2-208ENST00000510598 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
LEMD2-208ENST00000510598 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
LEMD2-208ENST00000510598 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.38
LEMD2-208ENST00000510598 CYP27B1O15528 508 aa12.65□□□□□ -0.38
LEMD2-208ENST00000510598 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
LEMD2-208ENST00000510598 N4BP2Q86UW6 1770 aaPredicted RBP12.65□□□□□ -0.38
LEMD2-208ENST00000510598 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
LEMD2-208ENST00000510598 KIF3CO14782 793 aa12.64□□□□□ -0.39
LEMD2-208ENST00000510598 SSFA2P28290 1259 aa12.64□□□□□ -0.39
LEMD2-208ENST00000510598 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
LEMD2-208ENST00000510598 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
LEMD2-208ENST00000510598 AK7Q96M32 723 aa12.63□□□□□ -0.39
LEMD2-208ENST00000510598 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
LEMD2-208ENST00000510598 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
LEMD2-208ENST00000510598 PXDNLA1KZ92 1463 aa12.63□□□□□ -0.39
LEMD2-208ENST00000510598 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
LEMD2-208ENST00000510598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
LEMD2-208ENST00000510598 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
LEMD2-208ENST00000510598 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
LEMD2-208ENST00000510598 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
LEMD2-208ENST00000510598 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
LEMD2-208ENST00000510598 PIGBQ92521 554 aa12.61□□□□□ -0.39
LEMD2-208ENST00000510598 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
LEMD2-208ENST00000510598 KDRP35968 1356 aa12.6□□□□□ -0.39
LEMD2-208ENST00000510598 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
LEMD2-208ENST00000510598 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
LEMD2-208ENST00000510598 SIK1P57059 783 aa12.6□□□□□ -0.39
LEMD2-208ENST00000510598 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
LEMD2-208ENST00000510598 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
LEMD2-208ENST00000510598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.399e-7■□□□□ 10.8
LEMD2-208ENST00000510598 PHF14O94880 888 aa12.58□□□□□ -0.4
LEMD2-208ENST00000510598 SBF1O95248 1867 aa12.58□□□□□ -0.4
LEMD2-208ENST00000510598 APLP1P51693 650 aa12.58□□□□□ -0.4
LEMD2-208ENST00000510598 ITPK1Q13572 414 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms