RNA–Protein interactions for RNA: ENST00000510499.1

TMED9-205, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-205ENST00000510499 ANKRD36BQ8N2N9 1353 aa13.87□□□□□ -0.19
TMED9-205ENST00000510499 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
TMED9-205ENST00000510499 NSD2O96028 1365 aa13.86□□□□□ -0.19
TMED9-205ENST00000510499 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
TMED9-205ENST00000510499 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
TMED9-205ENST00000510499 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
TMED9-205ENST00000510499 NME9Q86XW9 330 aa13.85□□□□□ -0.19
TMED9-205ENST00000510499 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
TMED9-205ENST00000510499 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
TMED9-205ENST00000510499 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
TMED9-205ENST00000510499 SBNO2Q9Y2G9 1366 aa13.84□□□□□ -0.19
TMED9-205ENST00000510499 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
TMED9-205ENST00000510499 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
TMED9-205ENST00000510499 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
TMED9-205ENST00000510499 USP47Q96K76 1375 aa13.83□□□□□ -0.2
TMED9-205ENST00000510499 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
TMED9-205ENST00000510499 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
TMED9-205ENST00000510499 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
TMED9-205ENST00000510499 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
TMED9-205ENST00000510499 MEGF6O75095 1541 aa13.8□□□□□ -0.2
TMED9-205ENST00000510499 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
TMED9-205ENST00000510499 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
TMED9-205ENST00000510499 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
TMED9-205ENST00000510499 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
TMED9-205ENST00000510499 IP6K1Q92551 441 aa13.79□□□□□ -0.2
TMED9-205ENST00000510499 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
TMED9-205ENST00000510499 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
TMED9-205ENST00000510499 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
TMED9-205ENST00000510499 A0A1W2PP64 1363 aa13.77□□□□□ -0.21
TMED9-205ENST00000510499 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.21
TMED9-205ENST00000510499 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
TMED9-205ENST00000510499 ITGB4P16144 1822 aa13.76□□□□□ -0.21
TMED9-205ENST00000510499 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
TMED9-205ENST00000510499 WWC3Q9ULE0 1092 aa13.76□□□□□ -0.21
TMED9-205ENST00000510499 WDR90Q96KV7 1748 aa13.76□□□□□ -0.21
TMED9-205ENST00000510499 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
TMED9-205ENST00000510499 KIF3CO14782 793 aa13.75□□□□□ -0.21
TMED9-205ENST00000510499 APLP1P51693 650 aa13.75□□□□□ -0.21
TMED9-205ENST00000510499 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
TMED9-205ENST00000510499 HOXC9P31274 260 aa13.74□□□□□ -0.21
TMED9-205ENST00000510499 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
TMED9-205ENST00000510499 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 AMPHP49418 695 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 AK7Q96M32 723 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
TMED9-205ENST00000510499 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
TMED9-205ENST00000510499 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
TMED9-205ENST00000510499 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
TMED9-205ENST00000510499 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.21
TMED9-205ENST00000510499 PHF14O94880 888 aa13.71□□□□□ -0.21
TMED9-205ENST00000510499 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
TMED9-205ENST00000510499 COG3Q96JB2 828 aa13.71□□□□□ -0.21
TMED9-205ENST00000510499 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
TMED9-205ENST00000510499 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
TMED9-205ENST00000510499 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
TMED9-205ENST00000510499 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
TMED9-205ENST00000510499 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
TMED9-205ENST00000510499 USHBP1Q8N6Y0 703 aa13.69□□□□□ -0.22
TMED9-205ENST00000510499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
TMED9-205ENST00000510499 TOMM70O94826 608 aa13.68□□□□□ -0.22
TMED9-205ENST00000510499 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
TMED9-205ENST00000510499 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
TMED9-205ENST00000510499 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
TMED9-205ENST00000510499 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
TMED9-205ENST00000510499 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
TMED9-205ENST00000510499 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
TMED9-205ENST00000510499 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
TMED9-205ENST00000510499 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
TMED9-205ENST00000510499 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
TMED9-205ENST00000510499 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
TMED9-205ENST00000510499 FBLN1P23142 703 aa13.66□□□□□ -0.22
TMED9-205ENST00000510499 SSFA2P28290 1259 aa13.66□□□□□ -0.22
TMED9-205ENST00000510499 DNAJC5GQ8N7S2 189 aa13.66□□□□□ -0.22
TMED9-205ENST00000510499 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
TMED9-205ENST00000510499 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
TMED9-205ENST00000510499 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
TMED9-205ENST00000510499 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
TMED9-205ENST00000510499 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
TMED9-205ENST00000510499 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
TMED9-205ENST00000510499 CAPN15O75808 1086 aa13.63□□□□□ -0.23
TMED9-205ENST00000510499 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
TMED9-205ENST00000510499 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
TMED9-205ENST00000510499 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
TMED9-205ENST00000510499 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
TMED9-205ENST00000510499 PCNTO95613 3336 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 GNPATO15228 680 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 CYP27B1O15528 508 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 MMP10P09238 476 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 KCNA4P22459 653 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
TMED9-205ENST00000510499 LINC00116Q8NCU8 138 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
TMED9-205ENST00000510499 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
TMED9-205ENST00000510499 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 INSRP06213 1382 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 FLT4P35916 1363 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 LOC102724428A0A0B4J2F2 783 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms