RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
SNF8-206ENST00000509989 DDX54Q8TDD1 881 aaKnown RBP18.54■□□□□ 0.56
SNF8-206ENST00000509989 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
SNF8-206ENST00000509989 BTAF1O14981 1849 aa18.53■□□□□ 0.56
SNF8-206ENST00000509989 CAMKK2Q96RR4 588 aa18.53■□□□□ 0.56
SNF8-206ENST00000509989 BAG6P46379 1132 aa18.52■□□□□ 0.56
SNF8-206ENST00000509989 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.55
SNF8-206ENST00000509989 BCL9O00512 1426 aa18.51■□□□□ 0.55
SNF8-206ENST00000509989 MTHFSP49914 203 aa18.51■□□□□ 0.55
SNF8-206ENST00000509989 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
SNF8-206ENST00000509989 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
SNF8-206ENST00000509989 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
SNF8-206ENST00000509989 ITGB4P16144 1822 aa18.49■□□□□ 0.55
SNF8-206ENST00000509989 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
SNF8-206ENST00000509989 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
SNF8-206ENST00000509989 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
SNF8-206ENST00000509989 IGSF1Q8N6C5 1336 aa18.48■□□□□ 0.55
SNF8-206ENST00000509989 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
SNF8-206ENST00000509989 CYP27B1O15528 508 aa18.47■□□□□ 0.55
SNF8-206ENST00000509989 IL13P35225 146 aa18.47■□□□□ 0.55
SNF8-206ENST00000509989 PROM2Q8N271 834 aa18.47■□□□□ 0.55
SNF8-206ENST00000509989 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
SNF8-206ENST00000509989 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
SNF8-206ENST00000509989 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.55
SNF8-206ENST00000509989 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
SNF8-206ENST00000509989 PRIM1P49642 420 aaKnown RBP18.43■□□□□ 0.54
SNF8-206ENST00000509989 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
SNF8-206ENST00000509989 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
SNF8-206ENST00000509989 LY75O60449 1722 aa18.4■□□□□ 0.54
SNF8-206ENST00000509989 PLSCR1O15162 318 aa18.4■□□□□ 0.54
SNF8-206ENST00000509989 HMOX1P09601 288 aa18.4■□□□□ 0.54
SNF8-206ENST00000509989 R3HDM1Q15032 1099 aaKnown RBP18.4■□□□□ 0.54
SNF8-206ENST00000509989 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
SNF8-206ENST00000509989 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
SNF8-206ENST00000509989 KCNQ4P56696 695 aa18.39■□□□□ 0.53
SNF8-206ENST00000509989 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.53
SNF8-206ENST00000509989 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
SNF8-206ENST00000509989 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
SNF8-206ENST00000509989 TXNRD1Q16881 649 aa18.38■□□□□ 0.53
SNF8-206ENST00000509989 PHKG2P15735 406 aa18.37■□□□□ 0.53
SNF8-206ENST00000509989 KDRP35968 1356 aa18.37■□□□□ 0.53
SNF8-206ENST00000509989 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
SNF8-206ENST00000509989 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
SNF8-206ENST00000509989 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
SNF8-206ENST00000509989 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
SNF8-206ENST00000509989 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
SNF8-206ENST00000509989 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
SNF8-206ENST00000509989 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
SNF8-206ENST00000509989 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
SNF8-206ENST00000509989 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
SNF8-206ENST00000509989 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
SNF8-206ENST00000509989 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.53
SNF8-206ENST00000509989 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
SNF8-206ENST00000509989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNF8-206ENST00000509989 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.52
SNF8-206ENST00000509989 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
SNF8-206ENST00000509989 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
SNF8-206ENST00000509989 CASZ1Q86V15 1759 aa18.32■□□□□ 0.52
SNF8-206ENST00000509989 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
SNF8-206ENST00000509989 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
SNF8-206ENST00000509989 PIGBQ92521 554 aa18.31■□□□□ 0.52
SNF8-206ENST00000509989 ZNF827Q17R98 1081 aa18.3■□□□□ 0.52
SNF8-206ENST00000509989 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
SNF8-206ENST00000509989 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
SNF8-206ENST00000509989 C5P01031 1676 aa18.28■□□□□ 0.52
SNF8-206ENST00000509989 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
SNF8-206ENST00000509989 LGR6Q9HBX8 967 aa18.27■□□□□ 0.52
SNF8-206ENST00000509989 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
SNF8-206ENST00000509989 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
SNF8-206ENST00000509989 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
SNF8-206ENST00000509989 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
SNF8-206ENST00000509989 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
SNF8-206ENST00000509989 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
SNF8-206ENST00000509989 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
SNF8-206ENST00000509989 LRP5O75197 1615 aa18.24■□□□□ 0.51
SNF8-206ENST00000509989 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
SNF8-206ENST00000509989 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
SNF8-206ENST00000509989 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
SNF8-206ENST00000509989 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
SNF8-206ENST00000509989 PRKAR2BP31323 418 aa18.23■□□□□ 0.51
SNF8-206ENST00000509989 SMIM5Q71RC9 77 aa18.23■□□□□ 0.51
SNF8-206ENST00000509989 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
SNF8-206ENST00000509989 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
SNF8-206ENST00000509989 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
SNF8-206ENST00000509989 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
SNF8-206ENST00000509989 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
SNF8-206ENST00000509989 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNF8-206ENST00000509989 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
SNF8-206ENST00000509989 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
SNF8-206ENST00000509989 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
SNF8-206ENST00000509989 QSER1Q2KHR3 1735 aa18.22■□□□□ 0.51
SNF8-206ENST00000509989 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
SNF8-206ENST00000509989 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
SNF8-206ENST00000509989 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
SNF8-206ENST00000509989 SIPA1L3O60292 1781 aaPredicted RBP18.21■□□□□ 0.51
SNF8-206ENST00000509989 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
SNF8-206ENST00000509989 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
SNF8-206ENST00000509989 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
SNF8-206ENST00000509989 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
SNF8-206ENST00000509989 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms