RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 HYPKQ9NX55 129 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 LRRIQ1Q96JM4 1722 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 PLA2R1Q13018 1463 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 EIF4A2Q14240 407 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 CCDC57Q2TAC2 916 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 NEUROD6Q96NK8 337 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 TFCP2L1Q9NZI6 479 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 ERC2O15083 957 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 RRP1P56182 461 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 ZRANB1Q9UGI0 708 aa6.32□□□□□ -1.4
PHF3-210ENST00000509876 LARP1Q6PKG0 1096 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
PHF3-210ENST00000509876 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 DUSP27Q5VZP5 1158 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 CWC22Q9HCG8 908 aaKnown RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 ANKRD45Q5TZF3 282 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 PPP1R42Q7Z4L9 355 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 COG6Q9Y2V7 657 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 BRINP3Q76B58 766 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 ANO8Q9HCE9 1232 aaPredicted RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 GOLGA6L22H0YM25 854 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 GNAI2P04899 355 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 TESK2Q96S53 571 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 TBC1D2BQ9UPU7 963 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 MAP3K19Q56UN5 1328 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 ZRSR1Q15695 479 aaKnown RBP6.31□□□□□ -1.4
PHF3-210ENST00000509876 RUFY2Q8WXA3 655 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 DIAPH3Q9NSV4 1193 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 POLKQ9UBT6 870 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
PHF3-210ENST00000509876 NKTRP30414 1462 aaKnown RBP6.3□□□□□ -1.4
PHF3-210ENST00000509876 ATP7BP35670 1465 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 ALKQ9UM73 1620 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 APBA3O96018 575 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 CCDC27Q2M243 656 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 MIS18AQ9NYP9 233 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 DBF4Q9UBU7 674 aaPredicted RBP6.3□□□□□ -1.4
PHF3-210ENST00000509876 MAP3K5Q99683 1374 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 JCADQ9P266 1359 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 CDC42BPGQ6DT37 1551 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 KDM4FA0A1W2PPD8 638 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 CCDC158Q5M9N0 1113 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 TTC39AQ5SRH9 613 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 UNC5CLQ8IV45 518 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 RILPL2Q969X0 211 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 CCNL1Q9UK58 526 aaPredicted RBP6.3□□□□□ -1.4
PHF3-210ENST00000509876 E9PCH4 1651 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 LAMC1P11047 1609 aa6.3□□□□□ -1.4
PHF3-210ENST00000509876 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
PHF3-210ENST00000509876 DCTN1Q14203 1278 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 NOB1Q9ULX3 412 aaKnown RBP6.29□□□□□ -1.4
PHF3-210ENST00000509876 PIK3C2BO00750 1634 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 APPP05067 770 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 SBNO2Q9Y2G9 1366 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 SPATA31A6Q5VVP1 1343 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 MFAP1P55081 439 aaKnown RBP6.29□□□□□ -1.4
PHF3-210ENST00000509876 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 MYD88Q99836 296 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 NYXQ9GZU5 481 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 DIP2AQ14689 1571 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 NBPF6Q5VWK0 638 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 NBPF5PQ86XG9 351 aaPredicted RBP6.29□□□□□ -1.4
PHF3-210ENST00000509876 NBPF4Q96M43 638 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 SETDB2Q96T68 719 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 RTL1A6NKG5 1358 aa6.29□□□□□ -1.4
PHF3-210ENST00000509876 POLR3AO14802 1390 aaPredicted RBP6.29□□□□□ -1.4
PHF3-210ENST00000509876 CDK11BP21127 795 aaKnown RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 TRAPPC3LQ5T215 181 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 EYA1Q99502 592 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 CENPQQ7L2Z9 268 aaPredicted RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 THRAP3Q9Y2W1 955 aaKnown RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 PTCH1Q13635 1447 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 PREX1Q8TCU6 1659 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 FBLN1P23142 703 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 AMER1Q5JTC6 1135 aaPredicted RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 CLASRPQ8N2M8 674 aaKnown RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 ZNF622Q969S3 477 aaKnown RBP eCLIP6.28□□□□□ -1.49e-7■□□□□ 10.2
PHF3-210ENST00000509876 CRBNQ96SW2 442 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 SYNE3Q6ZMZ3 975 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 DDX46Q7L014 1031 aaKnown RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 REREQ9P2R6 1566 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 TNS3Q68CZ2 1445 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 RAD21O60216 631 aa6.28□□□□□ -1.4
PHF3-210ENST00000509876 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
PHF3-210ENST00000509876 THUMPD2Q9BTF0 503 aaKnown RBP6.28□□□□□ -1.4
PHF3-210ENST00000509876 IL16Q14005 1332 aa6.27□□□□□ -1.4
PHF3-210ENST00000509876 SURF6O75683 361 aaKnown RBP6.27□□□□□ -1.41
PHF3-210ENST00000509876 KRT27Q7Z3Y8 459 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.27□□□□□ -1.41
PHF3-210ENST00000509876 RICTORQ6R327 1708 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 KIAA0232Q92628 1395 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 RNMTO43148 476 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms