RNA–Protein interactions for RNA: ENST00000509861.1

CSF1R-204, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 886 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-204ENST00000509861 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
CSF1R-204ENST00000509861 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
CSF1R-204ENST00000509861 ADRA2BP18089 450 aa15.96■□□□□ 0.15
CSF1R-204ENST00000509861 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
CSF1R-204ENST00000509861 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
CSF1R-204ENST00000509861 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
CSF1R-204ENST00000509861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.95■□□□□ 0.14
CSF1R-204ENST00000509861 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
CSF1R-204ENST00000509861 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
CSF1R-204ENST00000509861 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
CSF1R-204ENST00000509861 SPG7Q9UQ90 795 aa15.94■□□□□ 0.14
CSF1R-204ENST00000509861 KDRP35968 1356 aa15.94■□□□□ 0.14
CSF1R-204ENST00000509861 SHANK3Q9BYB0 1731 aa15.94■□□□□ 0.14
CSF1R-204ENST00000509861 EP400Q96L91 3159 aa15.93■□□□□ 0.14
CSF1R-204ENST00000509861 BAG6P46379 1132 aa15.93■□□□□ 0.14
CSF1R-204ENST00000509861 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
CSF1R-204ENST00000509861 PKD1L3Q7Z443 1732 aa15.93■□□□□ 0.14
CSF1R-204ENST00000509861 SBF2Q86WG5 1849 aa15.92■□□□□ 0.14
CSF1R-204ENST00000509861 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
CSF1R-204ENST00000509861 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
CSF1R-204ENST00000509861 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
CSF1R-204ENST00000509861 CYP27B1O15528 508 aa15.91■□□□□ 0.14
CSF1R-204ENST00000509861 APBA3O96018 575 aa15.91■□□□□ 0.14
CSF1R-204ENST00000509861 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
CSF1R-204ENST00000509861 KCNQ2O43526 872 aa15.9■□□□□ 0.14
CSF1R-204ENST00000509861 HMOX1P09601 288 aa15.9■□□□□ 0.14
CSF1R-204ENST00000509861 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
CSF1R-204ENST00000509861 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
CSF1R-204ENST00000509861 PTF1AQ7RTS3 328 aa15.9■□□□□ 0.14
CSF1R-204ENST00000509861 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
CSF1R-204ENST00000509861 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
CSF1R-204ENST00000509861 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
CSF1R-204ENST00000509861 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
CSF1R-204ENST00000509861 NKX1-1Q15270 411 aaPredicted RBP15.88■□□□□ 0.13
CSF1R-204ENST00000509861 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
CSF1R-204ENST00000509861 NHSQ6T4R5 1651 aa15.88■□□□□ 0.13
CSF1R-204ENST00000509861 PHKG2P15735 406 aa15.87■□□□□ 0.13
CSF1R-204ENST00000509861 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
CSF1R-204ENST00000509861 CAMKK2Q96RR4 588 aa15.87■□□□□ 0.13
CSF1R-204ENST00000509861 PLSCR1O15162 318 aa15.86■□□□□ 0.13
CSF1R-204ENST00000509861 U2AF1L5P0DN76 240 aaPredicted RBP15.86■□□□□ 0.13
CSF1R-204ENST00000509861 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.13
CSF1R-204ENST00000509861 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
CSF1R-204ENST00000509861 EZH2Q15910 746 aaKnown RBP15.85■□□□□ 0.13
CSF1R-204ENST00000509861 SYTL4Q96C24 671 aaPredicted RBP15.85■□□□□ 0.13
CSF1R-204ENST00000509861 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
CSF1R-204ENST00000509861 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
CSF1R-204ENST00000509861 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
CSF1R-204ENST00000509861 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.13
CSF1R-204ENST00000509861 FCHSD2O94868 740 aa15.83■□□□□ 0.12
CSF1R-204ENST00000509861 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
CSF1R-204ENST00000509861 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
CSF1R-204ENST00000509861 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
CSF1R-204ENST00000509861 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
CSF1R-204ENST00000509861 BTAF1O14981 1849 aa15.82■□□□□ 0.12
CSF1R-204ENST00000509861 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
CSF1R-204ENST00000509861 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
CSF1R-204ENST00000509861 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
CSF1R-204ENST00000509861 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
CSF1R-204ENST00000509861 ANP32CO43423 234 aa15.8■□□□□ 0.12
CSF1R-204ENST00000509861 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
CSF1R-204ENST00000509861 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
CSF1R-204ENST00000509861 ERVV-2B6SEH9 535 aa15.79■□□□□ 0.12
CSF1R-204ENST00000509861 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
CSF1R-204ENST00000509861 PROM2Q8N271 834 aa15.79■□□□□ 0.12
CSF1R-204ENST00000509861 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
CSF1R-204ENST00000509861 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
CSF1R-204ENST00000509861 PIGBQ92521 554 aa15.78■□□□□ 0.12
CSF1R-204ENST00000509861 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
CSF1R-204ENST00000509861 RREB1Q92766 1687 aa15.78■□□□□ 0.12
CSF1R-204ENST00000509861 ITGB4P16144 1822 aa15.78■□□□□ 0.12
CSF1R-204ENST00000509861 CABP4P57796 275 aa15.76■□□□□ 0.11
CSF1R-204ENST00000509861 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
CSF1R-204ENST00000509861 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
CSF1R-204ENST00000509861 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
CSF1R-204ENST00000509861 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
CSF1R-204ENST00000509861 NEFMP07197 916 aa15.75■□□□□ 0.11
CSF1R-204ENST00000509861 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
CSF1R-204ENST00000509861 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
CSF1R-204ENST00000509861 LGR6Q9HBX8 967 aa15.75■□□□□ 0.11
CSF1R-204ENST00000509861 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
CSF1R-204ENST00000509861 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
CSF1R-204ENST00000509861 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
CSF1R-204ENST00000509861 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
CSF1R-204ENST00000509861 NBPF14Q5TI25 921 aa15.74■□□□□ 0.11
CSF1R-204ENST00000509861 SCN11AQ9UI33 1791 aa15.74■□□□□ 0.11
CSF1R-204ENST00000509861 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
CSF1R-204ENST00000509861 NFATC2IPQ8NCF5 419 aa15.73■□□□□ 0.11
CSF1R-204ENST00000509861 LY75O60449 1722 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 LRRC4BQ9NT99 713 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 CCNL1Q9UK58 526 aaPredicted RBP15.72■□□□□ 0.11
CSF1R-204ENST00000509861 ASAP1Q9ULH1 1129 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 ADAMTS7Q9UKP4 1686 aa15.72■□□□□ 0.11
CSF1R-204ENST00000509861 MAPK8IP3Q9UPT6 1336 aa15.71■□□□□ 0.11
CSF1R-204ENST00000509861 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
CSF1R-204ENST00000509861 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
CSF1R-204ENST00000509861 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
CSF1R-204ENST00000509861 MRC1P22897 1456 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms