RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 DEKP35659 375 aaKnown RBP16.1■□□□□ 0.17
PRDM16-205ENST00000509860 NBPF6Q5VWK0 638 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 NBPF4Q96M43 638 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-205ENST00000509860 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 NHSL1Q5SYE7 1610 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 TRIM27P14373 513 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
PRDM16-205ENST00000509860 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
PRDM16-205ENST00000509860 IGHDP01880 384 aa16.09■□□□□ 0.17
PRDM16-205ENST00000509860 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.17
PRDM16-205ENST00000509860 CHL1O00533 1208 aa16.08■□□□□ 0.17
PRDM16-205ENST00000509860 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-205ENST00000509860 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
PRDM16-205ENST00000509860 BRPF1P55201 1214 aaPredicted RBP16.08■□□□□ 0.16
PRDM16-205ENST00000509860 GNAI1P63096 354 aa16.08■□□□□ 0.16
PRDM16-205ENST00000509860 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
PRDM16-205ENST00000509860 RGS12O14924 1447 aa16.08■□□□□ 0.16
PRDM16-205ENST00000509860 SMC4Q9NTJ3 1288 aa16.07■□□□□ 0.16
PRDM16-205ENST00000509860 ATF3P18847 181 aa16.07■□□□□ 0.16
PRDM16-205ENST00000509860 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
PRDM16-205ENST00000509860 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
PRDM16-205ENST00000509860 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
PRDM16-205ENST00000509860 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
PRDM16-205ENST00000509860 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
PRDM16-205ENST00000509860 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
PRDM16-205ENST00000509860 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
PRDM16-205ENST00000509860 NEFMP07197 916 aa16.06■□□□□ 0.16
PRDM16-205ENST00000509860 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 MVPQ14764 893 aaKnown RBP16.04■□□□□ 0.16
PRDM16-205ENST00000509860 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 ABCC6O95255 1503 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 ATF7IPQ6VMQ6 1270 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
PRDM16-205ENST00000509860 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
PRDM16-205ENST00000509860 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
PRDM16-205ENST00000509860 SPATA31A3Q5VYP0 1347 aa16.03■□□□□ 0.16
PRDM16-205ENST00000509860 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
PRDM16-205ENST00000509860 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
PRDM16-205ENST00000509860 N4BP2Q86UW6 1770 aaPredicted RBP16.02■□□□□ 0.16
PRDM16-205ENST00000509860 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
PRDM16-205ENST00000509860 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.16
PRDM16-205ENST00000509860 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.15
PRDM16-205ENST00000509860 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.15
PRDM16-205ENST00000509860 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
PRDM16-205ENST00000509860 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.15
PRDM16-205ENST00000509860 KIAA0232Q92628 1395 aa16.02■□□□□ 0.15
PRDM16-205ENST00000509860 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.15
PRDM16-205ENST00000509860 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.15
PRDM16-205ENST00000509860 ANKRD24Q8TF21 1146 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 ERBB3P21860 1342 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
PRDM16-205ENST00000509860 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 ABCC4O15439 1325 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
PRDM16-205ENST00000509860 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
PRDM16-205ENST00000509860 MEGF6O75095 1541 aa15.99■□□□□ 0.15
PRDM16-205ENST00000509860 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
PRDM16-205ENST00000509860 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
PRDM16-205ENST00000509860 GNAT3A8MTJ3 354 aa15.98■□□□□ 0.15
PRDM16-205ENST00000509860 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
PRDM16-205ENST00000509860 NBR1Q14596 966 aa15.97■□□□□ 0.15
PRDM16-205ENST00000509860 CPDO75976 1380 aa15.97■□□□□ 0.15
PRDM16-205ENST00000509860 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
PRDM16-205ENST00000509860 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
PRDM16-205ENST00000509860 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
PRDM16-205ENST00000509860 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
PRDM16-205ENST00000509860 MSH5O43196 834 aa15.95■□□□□ 0.14
PRDM16-205ENST00000509860 GLI3P10071 1580 aa15.95■□□□□ 0.14
PRDM16-205ENST00000509860 C5P01031 1676 aa15.95■□□□□ 0.14
PRDM16-205ENST00000509860 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
PRDM16-205ENST00000509860 FTSJ3Q8IY81 847 aaKnown RBP15.94■□□□□ 0.14
PRDM16-205ENST00000509860 CACNA1FO60840 1977 aa15.93■□□□□ 0.14
PRDM16-205ENST00000509860 PARP4Q9UKK3 1724 aaKnown RBP15.93■□□□□ 0.14
PRDM16-205ENST00000509860 ITPRIPQ8IWB1 547 aa15.93■□□□□ 0.14
PRDM16-205ENST00000509860 ZBTB7BO15156 539 aaPredicted RBP15.93■□□□□ 0.14
PRDM16-205ENST00000509860 CHRNA2Q15822 529 aa15.93■□□□□ 0.14
PRDM16-205ENST00000509860 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
PRDM16-205ENST00000509860 COL16A1Q07092 1604 aaPredicted RBP15.92■□□□□ 0.14
PRDM16-205ENST00000509860 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
PRDM16-205ENST00000509860 KDM6AO15550 1401 aaPredicted RBP15.92■□□□□ 0.14
PRDM16-205ENST00000509860 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
PRDM16-205ENST00000509860 AAMPQ13685 434 aa15.91■□□□□ 0.14
PRDM16-205ENST00000509860 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
PRDM16-205ENST00000509860 G2E3Q7L622 706 aa15.91■□□□□ 0.14
PRDM16-205ENST00000509860 COL5A2P05997 1499 aaPredicted RBP15.9■□□□□ 0.14
PRDM16-205ENST00000509860 KCNQ3O43525 872 aa15.9■□□□□ 0.14
PRDM16-205ENST00000509860 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
PRDM16-205ENST00000509860 MS4A1P11836 297 aa15.9■□□□□ 0.14
PRDM16-205ENST00000509860 MRC1P22897 1456 aa15.9■□□□□ 0.14
PRDM16-205ENST00000509860 IL27Q8NEV9 243 aa15.9■□□□□ 0.14
PRDM16-205ENST00000509860 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms