RNA–Protein interactions for RNA: ENST00000509854.5

SPOCK3-213, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 5

Gene SPOCK3, Length 556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-213	ENST00000509854	KCNQ2	O43526	872 aa		32.4	■■■□□ 2.78
SPOCK3-213	ENST00000509854	NPC1L1	Q9UHC9	1359 aa		32.4	■■■□□ 2.78
SPOCK3-213	ENST00000509854	PARD3	Q8TEW0	1356 aa		32.39	■■■□□ 2.78
SPOCK3-213	ENST00000509854	NCAPD2	Q15021	1401 aa		32.38	■■■□□ 2.77
SPOCK3-213	ENST00000509854	PLSCR1	O15162	318 aa		32.35	■■■□□ 2.77
SPOCK3-213	ENST00000509854	MTHFS	P49914	203 aa		32.34	■■■□□ 2.77
SPOCK3-213	ENST00000509854	IGSF1	Q8N6C5	1336 aa		32.32	■■■□□ 2.76
SPOCK3-213	ENST00000509854	PCDH11X	Q9BZA7	1347 aa		32.3	■■■□□ 2.76
SPOCK3-213	ENST00000509854	PCDH11Y	Q9BZA8	1340 aa		32.3	■■■□□ 2.76
SPOCK3-213	ENST00000509854	SBF2	Q86WG5	1849 aa		32.29	■■■□□ 2.76
SPOCK3-213	ENST00000509854	IL13	P35225	146 aa		32.28	■■■□□ 2.76
SPOCK3-213	ENST00000509854	SPG7	Q9UQ90	795 aa		32.28	■■■□□ 2.76
SPOCK3-213	ENST00000509854	PSD	A5PKW4	1024 aa	Predicted RBP	32.27	■■■□□ 2.76
SPOCK3-213	ENST00000509854	CYP27B1	O15528	508 aa		32.27	■■■□□ 2.76
SPOCK3-213	ENST00000509854	ZEB1	P37275	1124 aa	Predicted RBP	32.27	■■■□□ 2.76
SPOCK3-213	ENST00000509854	PRIM1	P49642	420 aa	Known RBP	32.26	■■■□□ 2.75
SPOCK3-213	ENST00000509854	SYTL4	Q96C24	671 aa	Predicted RBP	32.26	■■■□□ 2.75
SPOCK3-213	ENST00000509854	PROM2	Q8N271	834 aa		32.25	■■■□□ 2.75
SPOCK3-213	ENST00000509854	R3HDM1	Q15032	1099 aa	Known RBP	32.24	■■■□□ 2.75
SPOCK3-213	ENST00000509854	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.24	■■■□□ 2.75
SPOCK3-213	ENST00000509854	NHS	Q6T4R5	1651 aa		32.24	■■■□□ 2.75
SPOCK3-213	ENST00000509854	TXNRD1	Q16881	649 aa		32.22	■■■□□ 2.75
SPOCK3-213	ENST00000509854	NBPF14	Q5TI25	921 aa		32.22	■■■□□ 2.75
SPOCK3-213	ENST00000509854	AEBP1	Q8IUX7	1158 aa		32.22	■■■□□ 2.75
SPOCK3-213	ENST00000509854	SHANK3	Q9BYB0	1731 aa		32.22	■■■□□ 2.75
SPOCK3-213	ENST00000509854	SULT6B1	Q6IMI4	303 aa		32.2	■■■□□ 2.75
SPOCK3-213	ENST00000509854	RREB1	Q92766	1687 aa		32.18	■■■□□ 2.74
SPOCK3-213	ENST00000509854	DIAPH1	O60610	1272 aa	Known RBP	32.18	■■■□□ 2.74
SPOCK3-213	ENST00000509854	PLEKHG2	Q9H7P9	1386 aa		32.17	■■■□□ 2.74
SPOCK3-213	ENST00000509854	NKX1-1	Q15270	411 aa	Predicted RBP	32.16	■■■□□ 2.74
SPOCK3-213	ENST00000509854	PHKG2	P15735	406 aa		32.15	■■■□□ 2.74
SPOCK3-213	ENST00000509854	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.15	■■■□□ 2.74
SPOCK3-213	ENST00000509854	IFNL2	Q8IZJ0	200 aa		32.15	■■■□□ 2.74
SPOCK3-213	ENST00000509854	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.14	■■■□□ 2.74
SPOCK3-213	ENST00000509854	RGPD4	Q7Z3J3	1758 aa		32.14	■■■□□ 2.74
SPOCK3-213	ENST00000509854	NUP188	Q5SRE5	1749 aa		32.14	■■■□□ 2.74
SPOCK3-213	ENST00000509854	PKD1L3	Q7Z443	1732 aa		32.14	■■■□□ 2.74
SPOCK3-213	ENST00000509854	PPP2R1A	P30153	589 aa		32.13	■■■□□ 2.73
SPOCK3-213	ENST00000509854	KDR	P35968	1356 aa		32.13	■■■□□ 2.73
SPOCK3-213	ENST00000509854	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.12	■■■□□ 2.73
SPOCK3-213	ENST00000509854	DDX10	Q13206	875 aa	Known RBP	32.11	■■■□□ 2.73
SPOCK3-213	ENST00000509854	AMOT	Q4VCS5	1084 aa		32.11	■■■□□ 2.73
SPOCK3-213	ENST00000509854	DOT1L	Q8TEK3	1739 aa		32.11	■■■□□ 2.73
SPOCK3-213	ENST00000509854	HMOX1	P09601	288 aa		32.1	■■■□□ 2.73
SPOCK3-213	ENST00000509854	MPRIP	Q6WCQ1	1025 aa		32.1	■■■□□ 2.73
SPOCK3-213	ENST00000509854	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.09	■■■□□ 2.73
SPOCK3-213	ENST00000509854	BTAF1	O14981	1849 aa		32.09	■■■□□ 2.73
SPOCK3-213	ENST00000509854	COL3A1	P02461	1466 aa	Predicted RBP	32.09	■■■□□ 2.73
SPOCK3-213	ENST00000509854	CFAP53	Q96M91	514 aa		32.08	■■■□□ 2.73
SPOCK3-213	ENST00000509854	LRRC4B	Q9NT99	713 aa		32.07	■■■□□ 2.72
SPOCK3-213	ENST00000509854	U2SURP	O15042	1029 aa	Known RBP	32.06	■■■□□ 2.72
SPOCK3-213	ENST00000509854	SLC27A3	Q5K4L6	730 aa		32.05	■■■□□ 2.72
SPOCK3-213	ENST00000509854	STK32B	Q9NY57	414 aa		32.05	■■■□□ 2.72
SPOCK3-213	ENST00000509854	PIGB	Q92521	554 aa		32.04	■■■□□ 2.72
SPOCK3-213	ENST00000509854	HSP90AB1	P08238	724 aa	Known RBP	32.03	■■■□□ 2.72
SPOCK3-213	ENST00000509854	SRCAP	Q6ZRS2	3230 aa		32.03	■■■□□ 2.72
SPOCK3-213	ENST00000509854	KCNQ4	P56696	695 aa		32.02	■■■□□ 2.72
SPOCK3-213	ENST00000509854	SLC15A2	Q16348	729 aa		32.02	■■■□□ 2.72
SPOCK3-213	ENST00000509854	C1orf141	Q5JVX7	400 aa		32.02	■■■□□ 2.72
SPOCK3-213	ENST00000509854	DCAF5	Q96JK2	942 aa		32.01	■■■□□ 2.71
SPOCK3-213	ENST00000509854	TMOD3	Q9NYL9	352 aa		32.01	■■■□□ 2.71
SPOCK3-213	ENST00000509854	KAT6B	Q8WYB5	2073 aa		31.99	■■■□□ 2.71
SPOCK3-213	ENST00000509854	CCNL1	Q9UK58	526 aa	Predicted RBP	31.99	■■■□□ 2.71
SPOCK3-213	ENST00000509854	TOGARAM1	Q9Y4F4	1720 aa		31.98	■■■□□ 2.71
SPOCK3-213	ENST00000509854	PALLD	Q8WX93	1383 aa		31.97	■■■□□ 2.71
SPOCK3-213	ENST00000509854	SMARCC1	Q92922	1105 aa	Predicted RBP	31.97	■■■□□ 2.71
SPOCK3-213	ENST00000509854	NUDC	Q9Y266	331 aa		31.97	■■■□□ 2.71
SPOCK3-213	ENST00000509854	ERVV-2	B6SEH9	535 aa		31.96	■■■□□ 2.71
SPOCK3-213	ENST00000509854	ZNF827	Q17R98	1081 aa		31.96	■■■□□ 2.71
SPOCK3-213	ENST00000509854	KDM6A	O15550	1401 aa	Predicted RBP	31.95	■■■□□ 2.71
SPOCK3-213	ENST00000509854	MTHFSD	Q2M296	383 aa	Known RBP	31.94	■■■□□ 2.7
SPOCK3-213	ENST00000509854	AKAP4	Q5JQC9	854 aa		31.94	■■■□□ 2.7
SPOCK3-213	ENST00000509854	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.93	■■■□□ 2.7
SPOCK3-213	ENST00000509854	RALBP1	Q15311	655 aa		31.92	■■■□□ 2.7
SPOCK3-213	ENST00000509854	AKT1S1	Q96B36	256 aa		31.92	■■■□□ 2.7
SPOCK3-213	ENST00000509854	ASAP1	Q9ULH1	1129 aa		31.92	■■■□□ 2.7
SPOCK3-213	ENST00000509854	PAPPA	Q13219	1627 aa		31.91	■■■□□ 2.7
SPOCK3-213	ENST00000509854	CABP4	P57796	275 aa		31.91	■■■□□ 2.7
SPOCK3-213	ENST00000509854	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.9	■■■□□ 2.7
SPOCK3-213	ENST00000509854	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.9	■■■□□ 2.7
SPOCK3-213	ENST00000509854	ATG3	Q9NT62	314 aa		31.89	■■■□□ 2.7
SPOCK3-213	ENST00000509854	RSPH6A	Q9H0K4	717 aa		31.88	■■■□□ 2.69
SPOCK3-213	ENST00000509854	PRKAR2B	P31323	418 aa		31.87	■■■□□ 2.69
SPOCK3-213	ENST00000509854	LGR6	Q9HBX8	967 aa		31.86	■■■□□ 2.69
SPOCK3-213	ENST00000509854	LY75	O60449	1722 aa		31.86	■■■□□ 2.69
SPOCK3-213	ENST00000509854	LOC102724428	A0A0B4J2F2	783 aa		31.85	■■■□□ 2.69
SPOCK3-213	ENST00000509854	SIK1	P57059	783 aa		31.85	■■■□□ 2.69
SPOCK3-213	ENST00000509854	TFCP2L1	Q9NZI6	479 aa		31.85	■■■□□ 2.69
SPOCK3-213	ENST00000509854	ITGB4	P16144	1822 aa		31.84	■■■□□ 2.69
SPOCK3-213	ENST00000509854	NFATC2IP	Q8NCF5	419 aa		31.84	■■■□□ 2.69
SPOCK3-213	ENST00000509854	GAS2L2	Q8NHY3	880 aa		31.84	■■■□□ 2.69
SPOCK3-213	ENST00000509854	SPON1	Q9HCB6	807 aa		31.84	■■■□□ 2.69
SPOCK3-213	ENST00000509854	LRP5	O75197	1615 aa		31.84	■■■□□ 2.69
SPOCK3-213	ENST00000509854	RNMT	O43148	476 aa	Known RBP	31.83	■■■□□ 2.69
SPOCK3-213	ENST00000509854	ZBTB7A	O95365	584 aa		31.83	■■■□□ 2.69
SPOCK3-213	ENST00000509854	PHACTR3	Q96KR7	559 aa		31.83	■■■□□ 2.69
SPOCK3-213	ENST00000509854	FCHSD2	O94868	740 aa		31.82	■■■□□ 2.68
SPOCK3-213	ENST00000509854	HMGB2	P26583	209 aa	Known RBP	31.81	■■■□□ 2.68
SPOCK3-213	ENST00000509854	PNPLA7	Q6ZV29	1317 aa		31.79	■■■□□ 2.68
SPOCK3-213	ENST00000509854	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.79	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms