RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 NR1H3Q13133 447 aa4.9□□□□□ -1.63
SMN2-209ENST00000509805 MTMR14Q8NCE2 650 aa4.9□□□□□ -1.63
SMN2-209ENST00000509805 GJD4Q96KN9 370 aaPredicted RBP4.9□□□□□ -1.63
SMN2-209ENST00000509805 ZNF395Q9H8N7 513 aaPredicted RBP4.9□□□□□ -1.63
SMN2-209ENST00000509805 POLMQ9NP87 494 aaPredicted RBP4.9□□□□□ -1.63
SMN2-209ENST00000509805 CYLDQ9NQC7 956 aa4.9□□□□□ -1.63
SMN2-209ENST00000509805 ERVH48-1M5A8F1 160 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 GIGYF1O75420 1035 aaPredicted RBP4.89□□□□□ -1.63
SMN2-209ENST00000509805 PROCP04070 461 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 RNF20Q5VTR2 975 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 WWC1Q8IX03 1113 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 MEIOBQ8N635 442 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 ZNF784Q8NCA9 323 aaPredicted RBP4.89□□□□□ -1.63
SMN2-209ENST00000509805 OCSTAMPQ9BR26 566 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 TBC1D2BQ9UPU7 963 aa4.89□□□□□ -1.63
SMN2-209ENST00000509805 TTLL8A6PVC2 850 aa4.88□□□□□ -1.63
SMN2-209ENST00000509805 RAD21O60216 631 aa4.88□□□□□ -1.63
SMN2-209ENST00000509805 EIF4G2P78344 907 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMN2-209ENST00000509805 GALNT6Q8NCL4 622 aa4.88□□□□□ -1.63
SMN2-209ENST00000509805 KLF16Q9BXK1 252 aaPredicted RBP4.88□□□□□ -1.63
SMN2-209ENST00000509805 GDPD2Q9HCC8 539 aa4.88□□□□□ -1.63
SMN2-209ENST00000509805 PCDHB11Q9Y5F2 797 aa4.88□□□□□ -1.63
SMN2-209ENST00000509805 MEN1O00255 615 aa4.87□□□□□ -1.63
SMN2-209ENST00000509805 ITGB2P05107 769 aa4.87□□□□□ -1.63
SMN2-209ENST00000509805 MARSP56192 900 aaKnown RBP4.87□□□□□ -1.63
SMN2-209ENST00000509805 INSM2Q96T92 566 aaPredicted RBP4.87□□□□□ -1.63
SMN2-209ENST00000509805 MCCD1P59942 119 aaPredicted RBP4.86□□□□□ -1.63
SMN2-209ENST00000509805 VAC14Q08AM6 782 aa4.86□□□□□ -1.63
SMN2-209ENST00000509805 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.86□□□□□ -1.63
SMN2-209ENST00000509805 SLFNL1Q499Z3 407 aa4.86□□□□□ -1.63
SMN2-209ENST00000509805 ZNF385CQ66K41 422 aaPredicted RBP4.86□□□□□ -1.63
SMN2-209ENST00000509805 SEPT12Q8IYM1 358 aa4.86□□□□□ -1.63
SMN2-209ENST00000509805 SCARF2Q96GP6 870 aaPredicted RBP4.86□□□□□ -1.63
SMN2-209ENST00000509805 NLRP3Q96P20 1036 aa4.86□□□□□ -1.63
SMN2-209ENST00000509805 ATP5J2-PTCD1G3V325 749 aa4.85□□□□□ -1.63
SMN2-209ENST00000509805 MYCP01106 439 aaPredicted RBP4.85□□□□□ -1.63
SMN2-209ENST00000509805 ADH1AP07327 375 aa4.85□□□□□ -1.63
SMN2-209ENST00000509805 SEMA3FQ13275 785 aa4.85□□□□□ -1.63
SMN2-209ENST00000509805 SOS2Q07890 1332 aaPredicted RBP4.84□□□□□ -1.63
SMN2-209ENST00000509805 UBTFP17480 764 aaKnown RBP4.84□□□□□ -1.63
SMN2-209ENST00000509805 GTF2E1P29083 439 aaPredicted RBP4.84□□□□□ -1.63
SMN2-209ENST00000509805 KRT76Q01546 638 aa4.84□□□□□ -1.63
SMN2-209ENST00000509805 SLC27A3Q5K4L6 730 aa4.84□□□□□ -1.63
SMN2-209ENST00000509805 Q6ZVU0 165 aa4.84□□□□□ -1.63
SMN2-209ENST00000509805 SVOPQ8N4V2 548 aa4.84□□□□□ -1.63
SMN2-209ENST00000509805 DNMT3LQ9UJW3 386 aa4.84□□□□□ -1.63
SMN2-209ENST00000509805 CDC14CA4D256 554 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 ESPNB1AK53 854 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 ARHGEF15O94989 841 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 ADD1P35611 737 aaKnown RBP4.83□□□□□ -1.64
SMN2-209ENST00000509805 PTGIRP43119 386 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 CTSOP43234 321 aaPredicted RBP4.83□□□□□ -1.64
SMN2-209ENST00000509805 MCM6Q14566 821 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 WASHC4Q2M389 1173 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 OXLD1Q5BKU9 147 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 CC2D2BQ6DHV5 1058 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 PRICKLE2Q7Z3G6 844 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 CYP2U1Q7Z449 544 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 RNF135Q8IUD6 432 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 CNTNAP3BQ96NU0 1288 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 CNTNAP3Q9BZ76 1288 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 DOLKQ9UPQ8 538 aa4.83□□□□□ -1.64
SMN2-209ENST00000509805 SOCS7O14512 581 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 SPINT1O43278 529 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 CCDC125Q86Z20 511 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 DCAF5Q96JK2 942 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 RAB6BQ9NRW1 208 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 CEP126Q9P2H0 1117 aa4.82□□□□□ -1.64
SMN2-209ENST00000509805 LILRA1O75019 489 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 RHOQP17081 205 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 PTSQ03393 145 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 FLIIQ13045 1269 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 RIPOR1Q6ZS17 1223 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 LYSMD3Q7Z3D4 306 aa4.81□□□□□ -1.64
SMN2-209ENST00000509805 A0A1W2PRU2 124 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 PPFIA3O75145 1194 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 BAG6P46379 1132 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 SCTRP47872 440 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 TMEM132AQ24JP5 1023 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 GAS2L1Q99501 681 aaPredicted RBP4.8□□□□□ -1.64
SMN2-209ENST00000509805 ARHGEF10LQ9HCE6 1279 aa4.8□□□□□ -1.64
SMN2-209ENST00000509805 COBLO75128 1261 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 FURINP09958 794 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 SLURP2P0DP57 97 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 ERVK-9P63128 1117 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 USP4Q13107 963 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 IRF5Q13568 498 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 CCDC155Q8N6L0 562 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 RNF217Q8TC41 542 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 WHAMMQ8TF30 809 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 SIRT1Q96EB6 747 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 CDCA7Q9BWT1 371 aaPredicted RBP4.79□□□□□ -1.64
SMN2-209ENST00000509805 COG6Q9Y2V7 657 aa4.79□□□□□ -1.64
SMN2-209ENST00000509805 ARID1BQ8NFD5 2236 aaPredicted RBP4.78□□□□□ -1.64
SMN2-209ENST00000509805 PSME1Q06323 249 aa4.78□□□□□ -1.64
SMN2-209ENST00000509805 POU4F2Q12837 409 aa4.78□□□□□ -1.64
SMN2-209ENST00000509805 TMEM214Q6NUQ4 689 aaKnown RBP4.78□□□□□ -1.64
SMN2-209ENST00000509805 POM121Q96HA1 1249 aa4.78□□□□□ -1.64
SMN2-209ENST00000509805 CCDC85AQ96PX6 553 aaPredicted RBP4.78□□□□□ -1.64
SMN2-209ENST00000509805 GPR37L1O60883 481 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms