RNA–Protein interactions for RNA: ENST00000509727.1

NECAP2-211, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-211ENST00000509727 HMGB2P26583 209 aaKnown RBP10.05□□□□□ -0.8
NECAP2-211ENST00000509727 HOXC9P31274 260 aa10.05□□□□□ -0.8
NECAP2-211ENST00000509727 TMF1P82094 1093 aa10.05□□□□□ -0.8
NECAP2-211ENST00000509727 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
NECAP2-211ENST00000509727 BTAF1O14981 1849 aa10.05□□□□□ -0.8
NECAP2-211ENST00000509727 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
NECAP2-211ENST00000509727 USP54Q70EL1 1684 aa10.04□□□□□ -0.8
NECAP2-211ENST00000509727 FAM208AQ9UK61 1670 aaKnown RBP10.04□□□□□ -0.8
NECAP2-211ENST00000509727 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
NECAP2-211ENST00000509727 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
NECAP2-211ENST00000509727 KCNQ4P56696 695 aa10.04□□□□□ -0.8
NECAP2-211ENST00000509727 LRRC4BQ9NT99 713 aa10.04□□□□□ -0.8
NECAP2-211ENST00000509727 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
NECAP2-211ENST00000509727 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
NECAP2-211ENST00000509727 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
NECAP2-211ENST00000509727 USHBP1Q8N6Y0 703 aa10.03□□□□□ -0.8
NECAP2-211ENST00000509727 GGNBP2Q9H3C7 697 aa10.03□□□□□ -0.8
NECAP2-211ENST00000509727 FBLN1P23142 703 aa10.02□□□□□ -0.81
NECAP2-211ENST00000509727 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
NECAP2-211ENST00000509727 SGIP1Q9BQI5 828 aa10.02□□□□□ -0.81
NECAP2-211ENST00000509727 CGNL1Q0VF96 1302 aa10.02□□□□□ -0.81
NECAP2-211ENST00000509727 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.81
NECAP2-211ENST00000509727 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
NECAP2-211ENST00000509727 PPM1GO15355 546 aaPredicted RBP10.01□□□□□ -0.81
NECAP2-211ENST00000509727 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
NECAP2-211ENST00000509727 MIER1Q8N108 512 aa10.01□□□□□ -0.81
NECAP2-211ENST00000509727 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
NECAP2-211ENST00000509727 PAPPAQ13219 1627 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 DOT1LQ8TEK3 1739 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 MSL1Q68DK7 614 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 POLR3GLQ9BT43 218 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 PCDH11XQ9BZA7 1347 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 PCDH11YQ9BZA8 1340 aa10□□□□□ -0.81
NECAP2-211ENST00000509727 MEGF6O75095 1541 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 GRIN3BO60391 1043 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
NECAP2-211ENST00000509727 C1QTNF8P60827 252 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 AK7Q96M32 723 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 TESK2Q96S53 571 aa9.99□□□□□ -0.81
NECAP2-211ENST00000509727 FYB1O15117 783 aa9.98□□□□□ -0.81
NECAP2-211ENST00000509727 FLAD1Q8NFF5 587 aa9.98□□□□□ -0.81
NECAP2-211ENST00000509727 NLGN2Q8NFZ4 835 aa9.98□□□□□ -0.81
NECAP2-211ENST00000509727 FLT4P35916 1363 aa9.98□□□□□ -0.81
NECAP2-211ENST00000509727 PHF14O94880 888 aa9.97□□□□□ -0.81
NECAP2-211ENST00000509727 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
NECAP2-211ENST00000509727 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
NECAP2-211ENST00000509727 COL23A1Q86Y22 540 aaPredicted RBP9.97□□□□□ -0.81
NECAP2-211ENST00000509727 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
NECAP2-211ENST00000509727 PALLDQ8WX93 1383 aa9.97□□□□□ -0.81
NECAP2-211ENST00000509727 CHD4Q14839 1912 aa9.96□□□□□ -0.81
NECAP2-211ENST00000509727 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
NECAP2-211ENST00000509727 INSRP06213 1382 aa9.96□□□□□ -0.82
NECAP2-211ENST00000509727 DDX10Q13206 875 aaKnown RBP9.95□□□□□ -0.82
NECAP2-211ENST00000509727 NSD2O96028 1365 aa9.95□□□□□ -0.82
NECAP2-211ENST00000509727 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
NECAP2-211ENST00000509727 RGPD2P0DJD1 1756 aa9.95□□□□□ -0.82
NECAP2-211ENST00000509727 NSD3Q9BZ95 1437 aa9.94□□□□□ -0.82
NECAP2-211ENST00000509727 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
NECAP2-211ENST00000509727 TMOD3Q9NYL9 352 aa9.94□□□□□ -0.82
NECAP2-211ENST00000509727 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
NECAP2-211ENST00000509727 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
NECAP2-211ENST00000509727 LY75O60449 1722 aa9.93□□□□□ -0.82
NECAP2-211ENST00000509727 WWC3Q9ULE0 1092 aa9.93□□□□□ -0.82
NECAP2-211ENST00000509727 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
NECAP2-211ENST00000509727 YBX3P16989 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
NECAP2-211ENST00000509727 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
NECAP2-211ENST00000509727 ZNF526Q8TF50 670 aaPredicted RBP9.92□□□□□ -0.82
NECAP2-211ENST00000509727 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
NECAP2-211ENST00000509727 SHANK3Q9BYB0 1731 aa9.92□□□□□ -0.82
NECAP2-211ENST00000509727 C5P01031 1676 aa9.92□□□□□ -0.82
NECAP2-211ENST00000509727 TUBGCP6Q96RT7 1819 aa9.91□□□□□ -0.82
NECAP2-211ENST00000509727 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
NECAP2-211ENST00000509727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
NECAP2-211ENST00000509727 CYP27B1O15528 508 aa9.91□□□□□ -0.82
NECAP2-211ENST00000509727 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
NECAP2-211ENST00000509727 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
NECAP2-211ENST00000509727 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
NECAP2-211ENST00000509727 GNPATO15228 680 aa9.9□□□□□ -0.82
NECAP2-211ENST00000509727 SIK1P57059 783 aa9.9□□□□□ -0.82
NECAP2-211ENST00000509727 PIGBQ92521 554 aa9.9□□□□□ -0.82
NECAP2-211ENST00000509727 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
NECAP2-211ENST00000509727 SSFA2P28290 1259 aa9.89□□□□□ -0.83
NECAP2-211ENST00000509727 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
NECAP2-211ENST00000509727 ATP10DQ9P241 1426 aa9.89□□□□□ -0.83
NECAP2-211ENST00000509727 C4BP0C0L5 1744 aa9.88□□□□□ -0.83
NECAP2-211ENST00000509727 EYA1Q99502 592 aa9.88□□□□□ -0.83
NECAP2-211ENST00000509727 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
NECAP2-211ENST00000509727 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
NECAP2-211ENST00000509727 PHKG2P15735 406 aa9.87□□□□□ -0.83
NECAP2-211ENST00000509727 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
NECAP2-211ENST00000509727 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
NECAP2-211ENST00000509727 LINC00116Q8NCU8 138 aa9.87□□□□□ -0.83
NECAP2-211ENST00000509727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.83
NECAP2-211ENST00000509727 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
NECAP2-211ENST00000509727 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
NECAP2-211ENST00000509727 CABP4P57796 275 aa9.86□□□□□ -0.83
NECAP2-211ENST00000509727 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms