RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 FSTL1Q12841 308 aa19.92■□□□□ 0.78
HMGCR-208ENST00000509431 CABP2Q9NPB3 220 aa19.92■□□□□ 0.78
HMGCR-208ENST00000509431 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
HMGCR-208ENST00000509431 ANKRD36BQ8N2N9 1353 aa19.91■□□□□ 0.78
HMGCR-208ENST00000509431 C16orf71Q8IYS4 520 aaPredicted RBP19.9■□□□□ 0.78
HMGCR-208ENST00000509431 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
HMGCR-208ENST00000509431 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
HMGCR-208ENST00000509431 ZNF692Q9BU19 519 aaPredicted RBP19.89■□□□□ 0.77
HMGCR-208ENST00000509431 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
HMGCR-208ENST00000509431 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
HMGCR-208ENST00000509431 HTRA3P83110 453 aa19.88■□□□□ 0.77
HMGCR-208ENST00000509431 NMRK2Q9NPI5 230 aa19.88■□□□□ 0.77
HMGCR-208ENST00000509431 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
HMGCR-208ENST00000509431 DOT1LQ8TEK3 1739 aa19.87■□□□□ 0.77
HMGCR-208ENST00000509431 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
HMGCR-208ENST00000509431 NSD2O96028 1365 aa19.85■□□□□ 0.77
HMGCR-208ENST00000509431 USP47Q96K76 1375 aa19.84■□□□□ 0.77
HMGCR-208ENST00000509431 C5P01031 1676 aa19.84■□□□□ 0.77
HMGCR-208ENST00000509431 HSPA1AP0DMV8 641 aaKnown RBP19.83■□□□□ 0.77
HMGCR-208ENST00000509431 HSPA1BP0DMV9 641 aaKnown RBP19.83■□□□□ 0.77
HMGCR-208ENST00000509431 USP54Q70EL1 1684 aa19.82■□□□□ 0.76
HMGCR-208ENST00000509431 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
HMGCR-208ENST00000509431 LTN1O94822 1766 aa19.81■□□□□ 0.76
HMGCR-208ENST00000509431 C10orf71Q711Q0 1435 aa19.8■□□□□ 0.76
HMGCR-208ENST00000509431 PLEKHG2Q9H7P9 1386 aa19.8■□□□□ 0.76
HMGCR-208ENST00000509431 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
HMGCR-208ENST00000509431 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
HMGCR-208ENST00000509431 PCNTO95613 3336 aa19.78■□□□□ 0.76
HMGCR-208ENST00000509431 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
HMGCR-208ENST00000509431 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
HMGCR-208ENST00000509431 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
HMGCR-208ENST00000509431 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
HMGCR-208ENST00000509431 SMC1BQ8NDV3 1235 aa19.75■□□□□ 0.75
HMGCR-208ENST00000509431 KIF13BQ9NQT8 1826 aa19.74■□□□□ 0.75
HMGCR-208ENST00000509431 ARHGAP27Q6ZUM4 889 aa19.74■□□□□ 0.75
HMGCR-208ENST00000509431 KTN1Q86UP2 1357 aaKnown RBP19.73■□□□□ 0.75
HMGCR-208ENST00000509431 TGFB2P61812 414 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 AK7Q96M32 723 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 BCS1LQ9Y276 419 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 UBR3Q6ZT12 1888 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
HMGCR-208ENST00000509431 TNRC6CQ9HCJ0 1690 aaKnown RBP19.72■□□□□ 0.75
HMGCR-208ENST00000509431 ZCRB1Q8TBF4 217 aaKnown RBP19.72■□□□□ 0.75
HMGCR-208ENST00000509431 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
HMGCR-208ENST00000509431 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
HMGCR-208ENST00000509431 TOGARAM1Q9Y4F4 1720 aa19.71■□□□□ 0.75
HMGCR-208ENST00000509431 C9orf131Q5VYM1 1079 aa19.7■□□□□ 0.74
HMGCR-208ENST00000509431 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
HMGCR-208ENST00000509431 KIAA1551Q9HCM1 1747 aa19.7■□□□□ 0.74
HMGCR-208ENST00000509431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.69■□□□□ 0.74
HMGCR-208ENST00000509431 SSFA2P28290 1259 aa19.69■□□□□ 0.74
HMGCR-208ENST00000509431 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
HMGCR-208ENST00000509431 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
HMGCR-208ENST00000509431 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
HMGCR-208ENST00000509431 IP6K1Q92551 441 aa19.67■□□□□ 0.74
HMGCR-208ENST00000509431 RRAGCQ9HB90 399 aa19.67■□□□□ 0.74
HMGCR-208ENST00000509431 PHF14O94880 888 aa19.66■□□□□ 0.74
HMGCR-208ENST00000509431 ARFGEF1Q9Y6D6 1849 aa19.66■□□□□ 0.74
HMGCR-208ENST00000509431 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
HMGCR-208ENST00000509431 FCHSD2O94868 740 aa19.65■□□□□ 0.74
HMGCR-208ENST00000509431 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
HMGCR-208ENST00000509431 AMIGO3Q86WK7 504 aa19.64■□□□□ 0.73
HMGCR-208ENST00000509431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMGCR-208ENST00000509431 CGNL1Q0VF96 1302 aa19.64■□□□□ 0.73
HMGCR-208ENST00000509431 A0A0G2JLW4 131 aa19.63■□□□□ 0.73
HMGCR-208ENST00000509431 MMP10P09238 476 aa19.63■□□□□ 0.73
HMGCR-208ENST00000509431 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
HMGCR-208ENST00000509431 MEGF6O75095 1541 aa19.62■□□□□ 0.73
HMGCR-208ENST00000509431 NME9Q86XW9 330 aa19.62■□□□□ 0.73
HMGCR-208ENST00000509431 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
HMGCR-208ENST00000509431 RNF181Q9P0P0 153 aa19.6■□□□□ 0.73
HMGCR-208ENST00000509431 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
HMGCR-208ENST00000509431 ZC3H4Q9UPT8 1303 aaKnown RBP19.59■□□□□ 0.73
HMGCR-208ENST00000509431 FAM161AQ3B820 660 aa19.59■□□□□ 0.73
HMGCR-208ENST00000509431 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.73
HMGCR-208ENST00000509431 DPEP1P16444 411 aa19.58■□□□□ 0.72
HMGCR-208ENST00000509431 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
HMGCR-208ENST00000509431 SBF1O95248 1867 aa19.58■□□□□ 0.72
HMGCR-208ENST00000509431 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
HMGCR-208ENST00000509431 RGPD2P0DJD1 1756 aa19.57■□□□□ 0.72
HMGCR-208ENST00000509431 VEGFAP15692 232 aaPredicted RBP19.56■□□□□ 0.72
HMGCR-208ENST00000509431 SMIM5Q71RC9 77 aa19.56■□□□□ 0.72
HMGCR-208ENST00000509431 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
HMGCR-208ENST00000509431 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
HMGCR-208ENST00000509431 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
HMGCR-208ENST00000509431 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
HMGCR-208ENST00000509431 ITGB4P16144 1822 aa19.55■□□□□ 0.72
HMGCR-208ENST00000509431 MAP2P11137 1827 aaKnown RBP19.54■□□□□ 0.72
HMGCR-208ENST00000509431 FOXN1O15353 648 aa19.54■□□□□ 0.72
HMGCR-208ENST00000509431 RAPGEF4Q8WZA2 1011 aa19.54■□□□□ 0.72
HMGCR-208ENST00000509431 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
HMGCR-208ENST00000509431 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
HMGCR-208ENST00000509431 GNPATO15228 680 aa19.53■□□□□ 0.72
HMGCR-208ENST00000509431 CTCFP49711 727 aaPredicted RBP19.53■□□□□ 0.72
HMGCR-208ENST00000509431 LINC00116Q8NCU8 138 aa19.53■□□□□ 0.72
HMGCR-208ENST00000509431 C4AP0C0L4 1744 aa19.52■□□□□ 0.72
HMGCR-208ENST00000509431 KCNA3P22001 575 aa19.52■□□□□ 0.72
HMGCR-208ENST00000509431 HOXC9P31274 260 aa19.52■□□□□ 0.72
HMGCR-208ENST00000509431 TMF1P82094 1093 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms