RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
SDHA-210ENST00000509420 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
SDHA-210ENST00000509420 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
SDHA-210ENST00000509420 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
SDHA-210ENST00000509420 LRRC4BQ9NT99 713 aa18.6■□□□□ 0.57
SDHA-210ENST00000509420 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
SDHA-210ENST00000509420 KAT6BQ8WYB5 2073 aa18.58■□□□□ 0.57
SDHA-210ENST00000509420 UTRNP46939 3433 aa18.57■□□□□ 0.56
SDHA-210ENST00000509420 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
SDHA-210ENST00000509420 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
SDHA-210ENST00000509420 PTGER2P43116 358 aa18.56■□□□□ 0.56
SDHA-210ENST00000509420 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
SDHA-210ENST00000509420 ZNF827Q17R98 1081 aa18.56■□□□□ 0.56
SDHA-210ENST00000509420 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
SDHA-210ENST00000509420 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
SDHA-210ENST00000509420 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
SDHA-210ENST00000509420 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDHA-210ENST00000509420 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
SDHA-210ENST00000509420 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
SDHA-210ENST00000509420 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
SDHA-210ENST00000509420 SPON1Q9HCB6 807 aa18.53■□□□□ 0.56
SDHA-210ENST00000509420 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
SDHA-210ENST00000509420 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
SDHA-210ENST00000509420 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
SDHA-210ENST00000509420 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
SDHA-210ENST00000509420 ITGB4P16144 1822 aa18.51■□□□□ 0.55
SDHA-210ENST00000509420 CYP27B1O15528 508 aa18.51■□□□□ 0.55
SDHA-210ENST00000509420 ZBTB7AO95365 584 aa18.51■□□□□ 0.55
SDHA-210ENST00000509420 KCNQ4P56696 695 aa18.5■□□□□ 0.55
SDHA-210ENST00000509420 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
SDHA-210ENST00000509420 PANK3Q9H999 370 aa18.49■□□□□ 0.55
SDHA-210ENST00000509420 EYA1Q99502 592 aa18.48■□□□□ 0.55
SDHA-210ENST00000509420 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
SDHA-210ENST00000509420 GOLGB1Q14789 3259 aaKnown RBP18.47■□□□□ 0.55
SDHA-210ENST00000509420 RAPGEF4Q8WZA2 1011 aa18.47■□□□□ 0.55
SDHA-210ENST00000509420 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
SDHA-210ENST00000509420 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
SDHA-210ENST00000509420 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
SDHA-210ENST00000509420 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
SDHA-210ENST00000509420 C5P01031 1676 aa18.46■□□□□ 0.55
SDHA-210ENST00000509420 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
SDHA-210ENST00000509420 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
SDHA-210ENST00000509420 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
SDHA-210ENST00000509420 PNPLA7Q6ZV29 1317 aa18.45■□□□□ 0.54
SDHA-210ENST00000509420 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
SDHA-210ENST00000509420 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
SDHA-210ENST00000509420 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
SDHA-210ENST00000509420 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
SDHA-210ENST00000509420 MTFR1LQ9H019 292 aa18.43■□□□□ 0.54
SDHA-210ENST00000509420 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
SDHA-210ENST00000509420 IGSF1Q8N6C5 1336 aa18.42■□□□□ 0.54
SDHA-210ENST00000509420 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
SDHA-210ENST00000509420 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
SDHA-210ENST00000509420 PLEKHG2Q9H7P9 1386 aa18.39■□□□□ 0.53
SDHA-210ENST00000509420 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
SDHA-210ENST00000509420 PIGBQ92521 554 aa18.38■□□□□ 0.53
SDHA-210ENST00000509420 FHDC1Q9C0D6 1143 aaPredicted RBP18.38■□□□□ 0.53
SDHA-210ENST00000509420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
SDHA-210ENST00000509420 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
SDHA-210ENST00000509420 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
SDHA-210ENST00000509420 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
SDHA-210ENST00000509420 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
SDHA-210ENST00000509420 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
SDHA-210ENST00000509420 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
SDHA-210ENST00000509420 PHKG2P15735 406 aa18.36■□□□□ 0.53
SDHA-210ENST00000509420 SYT17Q9BSW7 474 aa18.36■□□□□ 0.53
SDHA-210ENST00000509420 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
SDHA-210ENST00000509420 AEBP1Q8IUX7 1158 aa18.35■□□□□ 0.53
SDHA-210ENST00000509420 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
SDHA-210ENST00000509420 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
SDHA-210ENST00000509420 KDRP35968 1356 aa18.33■□□□□ 0.53
SDHA-210ENST00000509420 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.52
SDHA-210ENST00000509420 ARXQ96QS3 562 aa18.33■□□□□ 0.52
SDHA-210ENST00000509420 TFCP2L1Q9NZI6 479 aa18.33■□□□□ 0.52
SDHA-210ENST00000509420 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
SDHA-210ENST00000509420 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
SDHA-210ENST00000509420 MORC1Q86VD1 984 aa18.32■□□□□ 0.52
SDHA-210ENST00000509420 IL13P35225 146 aa18.31■□□□□ 0.52
SDHA-210ENST00000509420 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
SDHA-210ENST00000509420 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
SDHA-210ENST00000509420 ASAP1Q9ULH1 1129 aa18.3■□□□□ 0.52
SDHA-210ENST00000509420 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
SDHA-210ENST00000509420 COL5A3P25940 1745 aaPredicted RBP18.29■□□□□ 0.52
SDHA-210ENST00000509420 ITPK1Q13572 414 aa18.29■□□□□ 0.52
SDHA-210ENST00000509420 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
SDHA-210ENST00000509420 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
SDHA-210ENST00000509420 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
SDHA-210ENST00000509420 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
SDHA-210ENST00000509420 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.52
SDHA-210ENST00000509420 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
SDHA-210ENST00000509420 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
SDHA-210ENST00000509420 SIK1P57059 783 aa18.26■□□□□ 0.51
SDHA-210ENST00000509420 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
SDHA-210ENST00000509420 CICQ96RK0 1608 aaPredicted RBP18.26■□□□□ 0.51
SDHA-210ENST00000509420 NLGN2Q8NFZ4 835 aa18.25■□□□□ 0.51
SDHA-210ENST00000509420 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
SDHA-210ENST00000509420 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
SDHA-210ENST00000509420 VIRMAQ69YN4 1812 aaKnown RBP18.25■□□□□ 0.51
SDHA-210ENST00000509420 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
SDHA-210ENST00000509420 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms