RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
RNF4-213ENST00000509388 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
RNF4-213ENST00000509388 AMOTQ4VCS5 1084 aa19.69■□□□□ 0.74
RNF4-213ENST00000509388 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
RNF4-213ENST00000509388 ZCRB1Q8TBF4 217 aaKnown RBP19.69■□□□□ 0.74
RNF4-213ENST00000509388 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
RNF4-213ENST00000509388 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
RNF4-213ENST00000509388 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
RNF4-213ENST00000509388 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
RNF4-213ENST00000509388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.67■□□□□ 0.745e-8■□□□□ 9.7
RNF4-213ENST00000509388 DISP2A7MBM2 1401 aa19.67■□□□□ 0.74
RNF4-213ENST00000509388 MEGF6O75095 1541 aa19.66■□□□□ 0.74
RNF4-213ENST00000509388 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
RNF4-213ENST00000509388 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
RNF4-213ENST00000509388 KRT27Q7Z3Y8 459 aa19.65■□□□□ 0.74
RNF4-213ENST00000509388 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
RNF4-213ENST00000509388 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
RNF4-213ENST00000509388 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
RNF4-213ENST00000509388 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
RNF4-213ENST00000509388 PCDH11XQ9BZA7 1347 aa19.63■□□□□ 0.73
RNF4-213ENST00000509388 PCDH11YQ9BZA8 1340 aa19.63■□□□□ 0.73
RNF4-213ENST00000509388 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
RNF4-213ENST00000509388 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
RNF4-213ENST00000509388 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
RNF4-213ENST00000509388 RGS12O14924 1447 aa19.62■□□□□ 0.73
RNF4-213ENST00000509388 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
RNF4-213ENST00000509388 PHACTR3Q96KR7 559 aa19.62■□□□□ 0.73
RNF4-213ENST00000509388 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
RNF4-213ENST00000509388 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
RNF4-213ENST00000509388 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
RNF4-213ENST00000509388 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
RNF4-213ENST00000509388 MARCH10Q8NA82 808 aaPredicted RBP19.59■□□□□ 0.73
RNF4-213ENST00000509388 PARP4Q9UKK3 1724 aaKnown RBP19.59■□□□□ 0.73
RNF4-213ENST00000509388 THSD7AQ9UPZ6 1657 aa19.59■□□□□ 0.73
RNF4-213ENST00000509388 CYP27B1O15528 508 aa19.58■□□□□ 0.72
RNF4-213ENST00000509388 PHKG2P15735 406 aa19.58■□□□□ 0.72
RNF4-213ENST00000509388 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
RNF4-213ENST00000509388 FAM182BQ5T319 152 aa19.57■□□□□ 0.72
RNF4-213ENST00000509388 FAM196AQ6ZSG2 479 aa19.57■□□□□ 0.72
RNF4-213ENST00000509388 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
RNF4-213ENST00000509388 NFE2L2Q16236 605 aa19.56■□□□□ 0.72
RNF4-213ENST00000509388 GNAT3A8MTJ3 354 aa19.55■□□□□ 0.72
RNF4-213ENST00000509388 NEUROD2Q15784 382 aa19.55■□□□□ 0.72
RNF4-213ENST00000509388 LRRC37A3O60309 1634 aa19.54■□□□□ 0.72
RNF4-213ENST00000509388 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
RNF4-213ENST00000509388 APAF1O14727 1248 aa19.54■□□□□ 0.72
RNF4-213ENST00000509388 RIPK4P57078 832 aa19.54■□□□□ 0.72
RNF4-213ENST00000509388 DCAF5Q96JK2 942 aa19.54■□□□□ 0.72
RNF4-213ENST00000509388 TMPOP42166 694 aaKnown RBP19.53■□□□□ 0.72
RNF4-213ENST00000509388 NKX1-1Q15270 411 aaPredicted RBP19.53■□□□□ 0.72
RNF4-213ENST00000509388 MPRIPQ6WCQ1 1025 aa19.53■□□□□ 0.72
RNF4-213ENST00000509388 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
RNF4-213ENST00000509388 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
RNF4-213ENST00000509388 SYTL4Q96C24 671 aaPredicted RBP19.52■□□□□ 0.72
RNF4-213ENST00000509388 MAP3K5Q99683 1374 aa19.52■□□□□ 0.72
RNF4-213ENST00000509388 HTATSF1O43719 755 aaKnown RBP19.51■□□□□ 0.71
RNF4-213ENST00000509388 ACSBG1Q96GR2 724 aa19.51■□□□□ 0.71
RNF4-213ENST00000509388 PKD1L3Q7Z443 1732 aa19.49■□□□□ 0.71
RNF4-213ENST00000509388 SENP3-EIF4A1A0A087X0R7 540 aa19.49■□□□□ 0.71
RNF4-213ENST00000509388 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
RNF4-213ENST00000509388 CABP4P57796 275 aa19.48■□□□□ 0.71
RNF4-213ENST00000509388 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
RNF4-213ENST00000509388 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
RNF4-213ENST00000509388 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
RNF4-213ENST00000509388 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
RNF4-213ENST00000509388 TEFQ10587 303 aa19.47■□□□□ 0.71
RNF4-213ENST00000509388 ILDR2Q71H61 639 aa19.47■□□□□ 0.71
RNF4-213ENST00000509388 MCM10Q7L590 875 aa19.47■□□□□ 0.71
RNF4-213ENST00000509388 BCL9O00512 1426 aa19.46■□□□□ 0.71
RNF4-213ENST00000509388 DCTN1Q14203 1278 aa19.46■□□□□ 0.71
RNF4-213ENST00000509388 IL17REQ8NFR9 667 aa19.46■□□□□ 0.71
RNF4-213ENST00000509388 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
RNF4-213ENST00000509388 TRIM37O94972 964 aa19.45■□□□□ 0.7
RNF4-213ENST00000509388 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
RNF4-213ENST00000509388 NGEFQ8N5V2 710 aa19.45■□□□□ 0.7
RNF4-213ENST00000509388 BRWD3Q6RI45 1802 aa19.45■□□□□ 0.7
RNF4-213ENST00000509388 KCNQ2O43526 872 aa19.44■□□□□ 0.7
RNF4-213ENST00000509388 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
RNF4-213ENST00000509388 NFATC2IPQ8NCF5 419 aa19.43■□□□□ 0.7
RNF4-213ENST00000509388 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
RNF4-213ENST00000509388 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
RNF4-213ENST00000509388 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
RNF4-213ENST00000509388 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
RNF4-213ENST00000509388 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
RNF4-213ENST00000509388 SHANK3Q9BYB0 1731 aa19.42■□□□□ 0.7
RNF4-213ENST00000509388 CCDC27Q2M243 656 aa19.41■□□□□ 0.7
RNF4-213ENST00000509388 THUMPD2Q9BTF0 503 aaKnown RBP19.41■□□□□ 0.7
RNF4-213ENST00000509388 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
RNF4-213ENST00000509388 CCDC125Q86Z20 511 aa19.4■□□□□ 0.7
RNF4-213ENST00000509388 PIGBQ92521 554 aa19.4■□□□□ 0.7
RNF4-213ENST00000509388 APBA3O96018 575 aa19.39■□□□□ 0.69
RNF4-213ENST00000509388 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
RNF4-213ENST00000509388 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
RNF4-213ENST00000509388 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
RNF4-213ENST00000509388 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
RNF4-213ENST00000509388 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
RNF4-213ENST00000509388 PTF1AQ7RTS3 328 aa19.37■□□□□ 0.69
RNF4-213ENST00000509388 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
RNF4-213ENST00000509388 SMARCC1Q92922 1105 aaPredicted RBP19.37■□□□□ 0.69
RNF4-213ENST00000509388 BAG6P46379 1132 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 522.1 ms