RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
LYSMD3-204ENST00000509384 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
LYSMD3-204ENST00000509384 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
LYSMD3-204ENST00000509384 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.21
LYSMD3-204ENST00000509384 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
LYSMD3-204ENST00000509384 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
LYSMD3-204ENST00000509384 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.2
LYSMD3-204ENST00000509384 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
LYSMD3-204ENST00000509384 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
LYSMD3-204ENST00000509384 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 RGPD5Q99666 1765 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
LYSMD3-204ENST00000509384 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
LYSMD3-204ENST00000509384 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
LYSMD3-204ENST00000509384 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.3■□□□□ 0.2
LYSMD3-204ENST00000509384 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
LYSMD3-204ENST00000509384 CRB1P82279 1406 aa16.3■□□□□ 0.2
LYSMD3-204ENST00000509384 TATP17735 454 aaPredicted RBP16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 PLIN1O60240 522 aa16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
LYSMD3-204ENST00000509384 BCAR3O75815 825 aa16.28■□□□□ 0.2
LYSMD3-204ENST00000509384 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
LYSMD3-204ENST00000509384 MEGF6O75095 1541 aa16.27■□□□□ 0.2
LYSMD3-204ENST00000509384 EVA1CP58658 441 aa16.27■□□□□ 0.2
LYSMD3-204ENST00000509384 STRN4Q9NRL3 753 aa16.27■□□□□ 0.2
LYSMD3-204ENST00000509384 LRRC37A3O60309 1634 aa16.26■□□□□ 0.19
LYSMD3-204ENST00000509384 CHL1O00533 1208 aa16.26■□□□□ 0.19
LYSMD3-204ENST00000509384 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
LYSMD3-204ENST00000509384 CARD10Q9BWT7 1032 aa16.25■□□□□ 0.19
LYSMD3-204ENST00000509384 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
LYSMD3-204ENST00000509384 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
LYSMD3-204ENST00000509384 COL14A1Q05707 1796 aaKnown RBP16.25■□□□□ 0.19
LYSMD3-204ENST00000509384 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 ADRA2BP18089 450 aa16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
LYSMD3-204ENST00000509384 OVOS2A0A0G2JMS6 1433 aa16.23■□□□□ 0.19
LYSMD3-204ENST00000509384 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
LYSMD3-204ENST00000509384 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
LYSMD3-204ENST00000509384 JCADQ9P266 1359 aa16.23■□□□□ 0.19
LYSMD3-204ENST00000509384 NUTM2BA6NNL0 878 aaPredicted RBP16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 NUTM2EB1AL46 878 aaPredicted RBP16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 NUTM2AQ8IVF1 878 aaPredicted RBP16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
LYSMD3-204ENST00000509384 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
LYSMD3-204ENST00000509384 VAMP4O75379 141 aa16.2■□□□□ 0.18
LYSMD3-204ENST00000509384 IL2RBP14784 551 aa16.2■□□□□ 0.18
LYSMD3-204ENST00000509384 TEFQ10587 303 aa16.2■□□□□ 0.18
LYSMD3-204ENST00000509384 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
LYSMD3-204ENST00000509384 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
LYSMD3-204ENST00000509384 PHKG2P15735 406 aa16.19■□□□□ 0.18
LYSMD3-204ENST00000509384 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
LYSMD3-204ENST00000509384 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
LYSMD3-204ENST00000509384 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
LYSMD3-204ENST00000509384 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
LYSMD3-204ENST00000509384 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
LYSMD3-204ENST00000509384 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
LYSMD3-204ENST00000509384 PDE3AQ14432 1141 aa16.18■□□□□ 0.18
LYSMD3-204ENST00000509384 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
LYSMD3-204ENST00000509384 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
LYSMD3-204ENST00000509384 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
LYSMD3-204ENST00000509384 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
LYSMD3-204ENST00000509384 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
LYSMD3-204ENST00000509384 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
LYSMD3-204ENST00000509384 CYP27B1O15528 508 aa16.16■□□□□ 0.18
LYSMD3-204ENST00000509384 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
LYSMD3-204ENST00000509384 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
LYSMD3-204ENST00000509384 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
LYSMD3-204ENST00000509384 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
LYSMD3-204ENST00000509384 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
LYSMD3-204ENST00000509384 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
LYSMD3-204ENST00000509384 BTBD11A6QL63 1104 aa16.14■□□□□ 0.18
LYSMD3-204ENST00000509384 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.18
LYSMD3-204ENST00000509384 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
LYSMD3-204ENST00000509384 MS4A1P11836 297 aa16.14■□□□□ 0.17
LYSMD3-204ENST00000509384 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms