RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GAS2L2Q8NHY3 880 aa18.91■□□□□ 0.62
PHF3-209ENST00000509330 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
PHF3-209ENST00000509330 IP6K1Q92551 441 aa18.91■□□□□ 0.62
PHF3-209ENST00000509330 KDRP35968 1356 aa18.91■□□□□ 0.62
PHF3-209ENST00000509330 C8orf34Q49A92 452 aa18.9■□□□□ 0.62
PHF3-209ENST00000509330 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
PHF3-209ENST00000509330 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
PHF3-209ENST00000509330 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
PHF3-209ENST00000509330 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
PHF3-209ENST00000509330 ZBTB40Q9NUA8 1239 aa18.88■□□□□ 0.61
PHF3-209ENST00000509330 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
PHF3-209ENST00000509330 CRB1P82279 1406 aa18.88■□□□□ 0.61
PHF3-209ENST00000509330 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
PHF3-209ENST00000509330 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
PHF3-209ENST00000509330 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
PHF3-209ENST00000509330 LTN1O94822 1766 aa18.86■□□□□ 0.61
PHF3-209ENST00000509330 KDM4FA0A1W2PPD8 638 aa18.86■□□□□ 0.61
PHF3-209ENST00000509330 IPO9Q96P70 1041 aaKnown RBP18.85■□□□□ 0.61
PHF3-209ENST00000509330 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
PHF3-209ENST00000509330 ANKRD24Q8TF21 1146 aa18.85■□□□□ 0.61
PHF3-209ENST00000509330 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
PHF3-209ENST00000509330 NFAT5O94916 1531 aa18.84■□□□□ 0.61
PHF3-209ENST00000509330 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
PHF3-209ENST00000509330 G2E3Q7L622 706 aa18.84■□□□□ 0.61
PHF3-209ENST00000509330 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
PHF3-209ENST00000509330 ZBTB7BO15156 539 aaPredicted RBP18.84■□□□□ 0.61
PHF3-209ENST00000509330 NOP58Q9Y2X3 529 aaKnown RBP18.84■□□□□ 0.61
PHF3-209ENST00000509330 F6X3S4 739 aa18.83■□□□□ 0.61
PHF3-209ENST00000509330 CHRNA2Q15822 529 aa18.83■□□□□ 0.61
PHF3-209ENST00000509330 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.61
PHF3-209ENST00000509330 AAMPQ13685 434 aa18.83■□□□□ 0.6
PHF3-209ENST00000509330 MPRIPQ6WCQ1 1025 aa18.83■□□□□ 0.6
PHF3-209ENST00000509330 MSH6P52701 1360 aa18.83■□□□□ 0.6
PHF3-209ENST00000509330 MAP3K5Q99683 1374 aa18.83■□□□□ 0.6
PHF3-209ENST00000509330 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
PHF3-209ENST00000509330 SEC24BO95487 1268 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
PHF3-209ENST00000509330 API5Q9BZZ5 524 aaKnown RBP18.81■□□□□ 0.6
PHF3-209ENST00000509330 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 ABCC4O15439 1325 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 ZNF530Q6P9A1 599 aaPredicted RBP18.81■□□□□ 0.6
PHF3-209ENST00000509330 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
PHF3-209ENST00000509330 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
PHF3-209ENST00000509330 ARHGAP45Q92619 1136 aa18.81■□□□□ 0.6
PHF3-209ENST00000509330 MST1RQ04912 1400 aa18.8■□□□□ 0.6
PHF3-209ENST00000509330 SLC4A3P48751 1232 aa18.8■□□□□ 0.6
PHF3-209ENST00000509330 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
PHF3-209ENST00000509330 KCNQ3O43525 872 aa18.78■□□□□ 0.6
PHF3-209ENST00000509330 EIF2S2P20042 333 aaKnown RBP18.78■□□□□ 0.6
PHF3-209ENST00000509330 CADPS2Q86UW7 1296 aa18.78■□□□□ 0.6
PHF3-209ENST00000509330 NLRP2Q9NX02 1062 aa18.78■□□□□ 0.6
PHF3-209ENST00000509330 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
PHF3-209ENST00000509330 APBB1O00213 710 aa18.77■□□□□ 0.6
PHF3-209ENST00000509330 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
PHF3-209ENST00000509330 TAF7Q15545 349 aaPredicted RBP18.77■□□□□ 0.6
PHF3-209ENST00000509330 KIAA0232Q92628 1395 aa18.77■□□□□ 0.6
PHF3-209ENST00000509330 SIRT2Q8IXJ6 389 aa18.77■□□□□ 0.59
PHF3-209ENST00000509330 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
PHF3-209ENST00000509330 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
PHF3-209ENST00000509330 USP19O94966 1318 aa18.75■□□□□ 0.59
PHF3-209ENST00000509330 MEIS3Q99687 375 aa18.75■□□□□ 0.59
PHF3-209ENST00000509330 TEFQ10587 303 aa18.75■□□□□ 0.59
PHF3-209ENST00000509330 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
PHF3-209ENST00000509330 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
PHF3-209ENST00000509330 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
PHF3-209ENST00000509330 ANXA1P04083 346 aa18.74■□□□□ 0.59
PHF3-209ENST00000509330 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
PHF3-209ENST00000509330 NPHP3Q7Z494 1330 aa18.74■□□□□ 0.59
PHF3-209ENST00000509330 USP54Q70EL1 1684 aa18.74■□□□□ 0.59
PHF3-209ENST00000509330 NBR1Q14596 966 aa18.73■□□□□ 0.59
PHF3-209ENST00000509330 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
PHF3-209ENST00000509330 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
PHF3-209ENST00000509330 RGS12O14924 1447 aa18.73■□□□□ 0.59
PHF3-209ENST00000509330 PXDNQ92626 1479 aa18.73■□□□□ 0.59
PHF3-209ENST00000509330 ERBB3P21860 1342 aa18.73■□□□□ 0.59
PHF3-209ENST00000509330 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
PHF3-209ENST00000509330 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
PHF3-209ENST00000509330 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
PHF3-209ENST00000509330 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
PHF3-209ENST00000509330 FLIIQ13045 1269 aa18.71■□□□□ 0.59
PHF3-209ENST00000509330 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
PHF3-209ENST00000509330 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
PHF3-209ENST00000509330 MED1Q15648 1581 aaPredicted RBP18.71■□□□□ 0.59
PHF3-209ENST00000509330 SLIT3O75094 1523 aa18.7■□□□□ 0.58
PHF3-209ENST00000509330 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
PHF3-209ENST00000509330 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
PHF3-209ENST00000509330 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
PHF3-209ENST00000509330 CHD1LQ86WJ1 897 aa18.7■□□□□ 0.58
PHF3-209ENST00000509330 PTPRCP08575 1304 aa18.69■□□□□ 0.58
PHF3-209ENST00000509330 NUCB1Q02818 461 aa18.69■□□□□ 0.58
PHF3-209ENST00000509330 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
PHF3-209ENST00000509330 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
PHF3-209ENST00000509330 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
PHF3-209ENST00000509330 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
PHF3-209ENST00000509330 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
PHF3-209ENST00000509330 KIF1AQ12756 1690 aa18.67■□□□□ 0.58
PHF3-209ENST00000509330 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
PHF3-209ENST00000509330 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms