RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L12C9JPN9 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L21D6R901 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 GDF9O60383 454 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 ADH1CP00326 375 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
TRAPPC13-210ENST00000509234 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 INSM1Q01101 510 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 FAM69CQ0P6D2 419 aa8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 ZNF697Q5TEC3 545 aa8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 SIX5Q8N196 739 aa8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 KIAA1024Q9UPX6 916 aa8.02□□□□□ -1.13
TRAPPC13-210ENST00000509234 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 TNFRSF10AO00220 468 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 NR3C2P08235 984 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 PDIA4P13667 645 aaKnown RBP8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 FSHRP23945 695 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 SCTRP47872 440 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 NR5A1Q13285 461 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 KRTAP4-6Q9BYQ5 205 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
TRAPPC13-210ENST00000509234 LILRA1O75019 489 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 TMEM164Q5U3C3 297 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 TRIM50Q86XT4 487 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 OGFOD1Q8N543 542 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 STK32AQ8WU08 396 aa8□□□□□ -1.13
TRAPPC13-210ENST00000509234 NOVA2Q9UNW9 492 aaKnown RBP8□□□□□ -1.13
TRAPPC13-210ENST00000509234 RASA1P20936 1047 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 GTF2IP78347 998 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 USP4Q13107 963 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 KLF16Q9BXK1 252 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
TRAPPC13-210ENST00000509234 CSB-PGBD3P0DP91 1061 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 ATP1A2P50993 1020 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 DHX9Q08211 1270 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 PDE4CQ08493 712 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 ANKMY2Q8IV38 441 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 CCDC116Q8IYX3 515 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 TMPRSS4Q9NRS4 437 aa7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 DNAAF2Q9NVR5 837 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-210ENST00000509234 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
TRAPPC13-210ENST00000509234 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC13-210ENST00000509234 CC2D2BQ6DHV5 1058 aa7.97□□□□□ -1.13
TRAPPC13-210ENST00000509234 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-210ENST00000509234 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC13-210ENST00000509234 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 WIPF1O43516 503 aa7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 ARID5BQ14865 1188 aa7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 SNIP1Q8TAD8 396 aaKnown RBP7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 CLP1Q92989 425 aaKnown RBP7.96□□□□□ -1.14
TRAPPC13-210ENST00000509234 M0R2N6 131 aa7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 SCNN1DP51172 638 aa7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 DPYDQ12882 1025 aa7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
TRAPPC13-210ENST00000509234 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 BRD1O95696 1058 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 RAB15P59190 212 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 TRIM26Q12899 539 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 NFX1Q12986 1120 aaKnown RBP7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 NNTQ13423 1086 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 PHLDB3Q6NSJ2 640 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 KCTD17Q8N5Z5 321 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
TRAPPC13-210ENST00000509234 SMPD1P17405 629 aa7.93□□□□□ -1.14
TRAPPC13-210ENST00000509234 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
TRAPPC13-210ENST00000509234 ZNF594Q96JF6 807 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-210ENST00000509234 CYLDQ9NQC7 956 aa7.93□□□□□ -1.14
TRAPPC13-210ENST00000509234 GMPR2Q9P2T1 348 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-210ENST00000509234 J3QL48 77 aa7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 MYCP01106 439 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 FOXC1Q12948 553 aa7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 Q6ZVU0 165 aa7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 TPCN2Q8NHX9 752 aa7.92□□□□□ -1.14
TRAPPC13-210ENST00000509234 SSFA2P28290 1259 aa7.91□□□□□ -1.14
TRAPPC13-210ENST00000509234 SEC13P55735 322 aa7.91□□□□□ -1.14
TRAPPC13-210ENST00000509234 HRH3Q9Y5N1 445 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms