RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 MCM10Q7L590 875 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 DDX46Q7L014 1031 aaKnown RBP13.05□□□□□ -0.32
CCSER1-209ENST00000509176 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
CCSER1-209ENST00000509176 PPP4R3AQ6IN85 833 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 VTI1AQ96AJ9 217 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
CCSER1-209ENST00000509176 MYO1BO43795 1136 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
CCSER1-209ENST00000509176 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
CCSER1-209ENST00000509176 WDR70Q9NW82 654 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
CCSER1-209ENST00000509176 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
CCSER1-209ENST00000509176 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
CCSER1-209ENST00000509176 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
CCSER1-209ENST00000509176 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
CCSER1-209ENST00000509176 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
CCSER1-209ENST00000509176 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
CCSER1-209ENST00000509176 HSPA2P54652 639 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 ZNF444Q8N0Y2 327 aaPredicted RBP13.03□□□□□ -0.32
CCSER1-209ENST00000509176 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 STIM1Q13586 685 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
CCSER1-209ENST00000509176 ANKRD30BQ9BXX2 1392 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 CDR1P51861 262 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
CCSER1-209ENST00000509176 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 TROQ12816 1431 aaPredicted RBP13.03□□□□□ -0.32
CCSER1-209ENST00000509176 DESP17661 470 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 PDCP20941 246 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 NME9Q86XW9 330 aa13.03□□□□□ -0.32
CCSER1-209ENST00000509176 SMC2O95347 1197 aa13.02□□□□□ -0.32
CCSER1-209ENST00000509176 SLC5A1P13866 664 aa13.02□□□□□ -0.32
CCSER1-209ENST00000509176 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.32
CCSER1-209ENST00000509176 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.32
CCSER1-209ENST00000509176 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.32
CCSER1-209ENST00000509176 NBPF4Q96M43 638 aa13.02□□□□□ -0.32
CCSER1-209ENST00000509176 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.33
CCSER1-209ENST00000509176 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
CCSER1-209ENST00000509176 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
CCSER1-209ENST00000509176 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
CCSER1-209ENST00000509176 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 CUL5Q93034 780 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 LIG1P18858 919 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
CCSER1-209ENST00000509176 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
CCSER1-209ENST00000509176 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
CCSER1-209ENST00000509176 CDKL5O76039 1030 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 PIP4K2AP48426 406 aaPredicted RBP13□□□□□ -0.33
CCSER1-209ENST00000509176 SMARCE1Q969G3 411 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
CCSER1-209ENST00000509176 AKNAQ7Z591 1439 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 MNS1Q8NEH6 495 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 NEFHP12036 1026 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 SLC4A8Q2Y0W8 1093 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 FCHSD2O94868 740 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
CCSER1-209ENST00000509176 DRC1Q96MC2 740 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 DEF6Q9H4E7 631 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 CABP5Q9NP86 173 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 FIBPO43427 364 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 ME1P48163 572 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 SETQ01105 290 aaPredicted RBP13□□□□□ -0.33
CCSER1-209ENST00000509176 MAP3K12Q12852 859 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 AAMPQ13685 434 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 MYO6Q9UM54 1294 aa13□□□□□ -0.33
CCSER1-209ENST00000509176 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
CCSER1-209ENST00000509176 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
CCSER1-209ENST00000509176 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 NAPBQ9H115 298 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
CCSER1-209ENST00000509176 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
CCSER1-209ENST00000509176 DNAI2Q9GZS0 605 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 FAM13BQ9NYF5 915 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
CCSER1-209ENST00000509176 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
CCSER1-209ENST00000509176 A0A087WZG4 1122 aa12.98□□□□□ -0.33
CCSER1-209ENST00000509176 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
CCSER1-209ENST00000509176 DDB1Q16531 1140 aa12.98□□□□□ -0.33
CCSER1-209ENST00000509176 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
CCSER1-209ENST00000509176 NF2P35240 595 aa12.98□□□□□ -0.33
CCSER1-209ENST00000509176 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
CCSER1-209ENST00000509176 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
CCSER1-209ENST00000509176 DHX8Q14562 1220 aaKnown RBP12.97□□□□□ -0.33
CCSER1-209ENST00000509176 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
CCSER1-209ENST00000509176 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
CCSER1-209ENST00000509176 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms