RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 ATF7IPQ6VMQ6 1270 aa12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.06□□□□□ -0.48
PDGFRA-207ENST00000509092 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 LOC102724159A0A0B4J2E5 919 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 PWP2Q15269 919 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 GCC1Q96CN9 775 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 USP26Q9BXU7 913 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
PDGFRA-207ENST00000509092 TNNT1P13805 278 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 ICE2Q659A1 982 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 ST7Q9NRC1 585 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 ATP10AO60312 1499 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 CD109Q6YHK3 1445 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 ARAP3Q8WWN8 1544 aa12.04□□□□□ -0.48
PDGFRA-207ENST00000509092 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 TMEM57Q8N5G2 664 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 GLI2P10070 1586 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 KIF13AQ9H1H9 1805 aa12.03□□□□□ -0.48
PDGFRA-207ENST00000509092 GADD45BO75293 160 aaPredicted RBP12.02□□□□□ -0.48
PDGFRA-207ENST00000509092 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.48
PDGFRA-207ENST00000509092 TXLNBQ8N3L3 684 aa12.02□□□□□ -0.48
PDGFRA-207ENST00000509092 MAP3K4Q9Y6R4 1608 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 RAD50Q92878 1312 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 NOS1P29475 1434 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 MX1P20591 662 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 CASQ1P31415 396 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
PDGFRA-207ENST00000509092 AP5Z1O43299 807 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 MLECQ14165 292 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 SPC24Q8NBT2 197 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 ZNF446Q9NWS9 450 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 FANCAO15360 1455 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 TMEM87AQ8NBN3 555 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 SLC26A8Q96RN1 970 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 MED14O60244 1454 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
PDGFRA-207ENST00000509092 PTGS1P23219 599 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 USP48Q86UV5 1035 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 KCNG1Q9UIX4 513 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
PDGFRA-207ENST00000509092 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
PDGFRA-207ENST00000509092 TSPOAP1O95153 1857 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 GUCY2CP25092 1073 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 HNRNPMP52272 730 aaKnown RBP eCLIP12□□□□□ -0.49
PDGFRA-207ENST00000509092 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 TEX35Q5T0J7 233 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 SSH1Q8WYL5 1049 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 ERO1AQ96HE7 468 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 FUCA2Q9BTY2 467 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 IFT57Q9NWB7 429 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 POLKQ9UBT6 870 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
PDGFRA-207ENST00000509092 PLA2R1Q13018 1463 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 GSPT1P15170 499 aaKnown RBP11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 SYT10Q6XYQ8 523 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 MYO1CO00159 1063 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 SMARCA5O60264 1052 aaPredicted RBP11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
PDGFRA-207ENST00000509092 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 ABCC1P33527 1531 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 ATAD2Q6PL18 1390 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 MCM2P49736 904 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 CUL4AQ13619 759 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 C10orf67Q8IYJ2 551 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
PDGFRA-207ENST00000509092 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 ELF2Q15723 593 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 TPD52L1Q16890 204 aaPredicted RBP11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms