RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FLT4P35916 1363 aa20.45■□□□□ 0.86
UBE2D3-228ENST00000508974 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
UBE2D3-228ENST00000508974 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
UBE2D3-228ENST00000508974 DOT1LQ8TEK3 1739 aa20.44■□□□□ 0.86
UBE2D3-228ENST00000508974 TNNT2P45379 298 aaPredicted RBP20.43■□□□□ 0.86
UBE2D3-228ENST00000508974 NBPF14Q5TI25 921 aa20.43■□□□□ 0.86
UBE2D3-228ENST00000508974 PANK3Q9H999 370 aa20.43■□□□□ 0.86
UBE2D3-228ENST00000508974 PLSCR1O15162 318 aa20.42■□□□□ 0.86
UBE2D3-228ENST00000508974 INSRP06213 1382 aa20.42■□□□□ 0.86
UBE2D3-228ENST00000508974 KIF24Q5T7B8 1368 aa20.38■□□□□ 0.85
UBE2D3-228ENST00000508974 PROM2Q8N271 834 aa20.38■□□□□ 0.85
UBE2D3-228ENST00000508974 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
UBE2D3-228ENST00000508974 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
UBE2D3-228ENST00000508974 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
UBE2D3-228ENST00000508974 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
UBE2D3-228ENST00000508974 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
UBE2D3-228ENST00000508974 KIF7Q2M1P5 1343 aa20.35■□□□□ 0.85
UBE2D3-228ENST00000508974 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
UBE2D3-228ENST00000508974 POLKQ9UBT6 870 aa20.35■□□□□ 0.85
UBE2D3-228ENST00000508974 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
UBE2D3-228ENST00000508974 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
UBE2D3-228ENST00000508974 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-228ENST00000508974 PKD1L3Q7Z443 1732 aa20.32■□□□□ 0.84
UBE2D3-228ENST00000508974 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
UBE2D3-228ENST00000508974 PDGFDQ9GZP0 370 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-228ENST00000508974 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
UBE2D3-228ENST00000508974 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
UBE2D3-228ENST00000508974 PAPPAQ13219 1627 aa20.29■□□□□ 0.84
UBE2D3-228ENST00000508974 NSD2O96028 1365 aa20.29■□□□□ 0.84
UBE2D3-228ENST00000508974 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 EYA1Q99502 592 aa20.28■□□□□ 0.84
UBE2D3-228ENST00000508974 ITGB4P16144 1822 aa20.27■□□□□ 0.84
UBE2D3-228ENST00000508974 LY75O60449 1722 aa20.27■□□□□ 0.83
UBE2D3-228ENST00000508974 NCAPD2Q15021 1401 aa20.27■□□□□ 0.83
UBE2D3-228ENST00000508974 KCNQ4P56696 695 aa20.26■□□□□ 0.83
UBE2D3-228ENST00000508974 SLC15A2Q16348 729 aa20.26■□□□□ 0.83
UBE2D3-228ENST00000508974 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
UBE2D3-228ENST00000508974 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
UBE2D3-228ENST00000508974 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
UBE2D3-228ENST00000508974 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
UBE2D3-228ENST00000508974 CYP27B1O15528 508 aa20.24■□□□□ 0.83
UBE2D3-228ENST00000508974 ZBTB7AO95365 584 aa20.24■□□□□ 0.83
UBE2D3-228ENST00000508974 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
UBE2D3-228ENST00000508974 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
UBE2D3-228ENST00000508974 PPP1R1BQ9UD71 204 aaPredicted RBP20.22■□□□□ 0.83
UBE2D3-228ENST00000508974 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
UBE2D3-228ENST00000508974 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
UBE2D3-228ENST00000508974 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
UBE2D3-228ENST00000508974 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-228ENST00000508974 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
UBE2D3-228ENST00000508974 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
UBE2D3-228ENST00000508974 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
UBE2D3-228ENST00000508974 SLC27A3Q5K4L6 730 aa20.18■□□□□ 0.82
UBE2D3-228ENST00000508974 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
UBE2D3-228ENST00000508974 C5P01031 1676 aa20.18■□□□□ 0.82
UBE2D3-228ENST00000508974 QSER1Q2KHR3 1735 aa20.17■□□□□ 0.82
UBE2D3-228ENST00000508974 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
UBE2D3-228ENST00000508974 PER1O15534 1290 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-228ENST00000508974 AEBP1Q8IUX7 1158 aa20.15■□□□□ 0.82
UBE2D3-228ENST00000508974 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
UBE2D3-228ENST00000508974 PALLDQ8WX93 1383 aa20.14■□□□□ 0.81
UBE2D3-228ENST00000508974 PHKG2P15735 406 aa20.14■□□□□ 0.81
UBE2D3-228ENST00000508974 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
UBE2D3-228ENST00000508974 IFNL2Q8IZJ0 200 aa20.13■□□□□ 0.81
UBE2D3-228ENST00000508974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.81
UBE2D3-228ENST00000508974 PTGER2P43116 358 aa20.12■□□□□ 0.81
UBE2D3-228ENST00000508974 MTHFSP49914 203 aa20.12■□□□□ 0.81
UBE2D3-228ENST00000508974 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-228ENST00000508974 PIGBQ92521 554 aa20.12■□□□□ 0.81
UBE2D3-228ENST00000508974 MTFR1LQ9H019 292 aa20.12■□□□□ 0.81
UBE2D3-228ENST00000508974 PNPLA7Q6ZV29 1317 aa20.11■□□□□ 0.81
UBE2D3-228ENST00000508974 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
UBE2D3-228ENST00000508974 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
UBE2D3-228ENST00000508974 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
UBE2D3-228ENST00000508974 IL13P35225 146 aa20.1■□□□□ 0.81
UBE2D3-228ENST00000508974 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-228ENST00000508974 ZNF530Q6P9A1 599 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-228ENST00000508974 C4BP0C0L5 1744 aa20.08■□□□□ 0.81
UBE2D3-228ENST00000508974 HMOX1P09601 288 aa20.07■□□□□ 0.8
UBE2D3-228ENST00000508974 SMARCC1Q92922 1105 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-228ENST00000508974 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-228ENST00000508974 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-228ENST00000508974 KCNA4P22459 653 aa20.06■□□□□ 0.8
UBE2D3-228ENST00000508974 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
UBE2D3-228ENST00000508974 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-228ENST00000508974 SGIP1Q9BQI5 828 aa20.05■□□□□ 0.8
UBE2D3-228ENST00000508974 KDRP35968 1356 aa20.05■□□□□ 0.8
UBE2D3-228ENST00000508974 PLEKHG2Q9H7P9 1386 aa20.05■□□□□ 0.8
UBE2D3-228ENST00000508974 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
UBE2D3-228ENST00000508974 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
UBE2D3-228ENST00000508974 FHDC1Q9C0D6 1143 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-228ENST00000508974 SCN11AQ9UI33 1791 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 UBR3Q6ZT12 1888 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 COL24A1Q17RW2 1714 aa20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-228ENST00000508974 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms