RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 PER1O15534 1290 aaPredicted RBP32.12■■■□□ 2.73
CSNK1G3-204ENST00000508708 KCNQ2O43526 872 aa32.12■■■□□ 2.73
CSNK1G3-204ENST00000508708 ZCRB1Q8TBF4 217 aaKnown RBP32.09■■■□□ 2.73
CSNK1G3-204ENST00000508708 PSDA5PKW4 1024 aaPredicted RBP32.08■■■□□ 2.73
CSNK1G3-204ENST00000508708 MORC1Q86VD1 984 aa32.08■■■□□ 2.73
CSNK1G3-204ENST00000508708 DDX54Q8TDD1 881 aaKnown RBP32.08■■■□□ 2.73
CSNK1G3-204ENST00000508708 RAPGEF4Q8WZA2 1011 aa32.08■■■□□ 2.73
CSNK1G3-204ENST00000508708 ACSBG1Q96GR2 724 aa32.08■■■□□ 2.73
CSNK1G3-204ENST00000508708 PKD1L3Q7Z443 1732 aa32.07■■■□□ 2.72
CSNK1G3-204ENST00000508708 BTAF1O14981 1849 aa32.07■■■□□ 2.72
CSNK1G3-204ENST00000508708 DOT1LQ8TEK3 1739 aa32.06■■■□□ 2.72
CSNK1G3-204ENST00000508708 EIF4A2Q14240 407 aaKnown RBP32.06■■■□□ 2.72
CSNK1G3-204ENST00000508708 EYA1Q99502 592 aa32.05■■■□□ 2.72
CSNK1G3-204ENST00000508708 TATP17735 454 aaPredicted RBP32.04■■■□□ 2.72
CSNK1G3-204ENST00000508708 PROM2Q8N271 834 aa32.04■■■□□ 2.72
CSNK1G3-204ENST00000508708 R3HDM1Q15032 1099 aaKnown RBP32.03■■■□□ 2.72
CSNK1G3-204ENST00000508708 LRP5O75197 1615 aa32■■■□□ 2.71
CSNK1G3-204ENST00000508708 NPC1L1Q9UHC9 1359 aa32■■■□□ 2.71
CSNK1G3-204ENST00000508708 IGSF1Q8N6C5 1336 aa31.99■■■□□ 2.71
CSNK1G3-204ENST00000508708 PCDH11XQ9BZA7 1347 aa31.99■■■□□ 2.71
CSNK1G3-204ENST00000508708 PCDH11YQ9BZA8 1340 aa31.99■■■□□ 2.71
CSNK1G3-204ENST00000508708 KAT6BQ8WYB5 2073 aa31.98■■■□□ 2.71
CSNK1G3-204ENST00000508708 TXNRD1Q16881 649 aa31.97■■■□□ 2.71
CSNK1G3-204ENST00000508708 ANO8Q9HCE9 1232 aaPredicted RBP31.96■■■□□ 2.71
CSNK1G3-204ENST00000508708 PLEKHG2Q9H7P9 1386 aa31.95■■■□□ 2.71
CSNK1G3-204ENST00000508708 CYP27B1O15528 508 aa31.95■■■□□ 2.71
CSNK1G3-204ENST00000508708 PAPPAQ13219 1627 aa31.94■■■□□ 2.7
CSNK1G3-204ENST00000508708 NBPF14Q5TI25 921 aa31.94■■■□□ 2.7
CSNK1G3-204ENST00000508708 TOGARAM1Q9Y4F4 1720 aa31.94■■■□□ 2.7
CSNK1G3-204ENST00000508708 PRIM1P49642 420 aaKnown RBP31.92■■■□□ 2.7
CSNK1G3-204ENST00000508708 CC2D1BQ5T0F9 858 aaKnown RBP31.92■■■□□ 2.7
CSNK1G3-204ENST00000508708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.9■■■□□ 2.74e-6■□□□□ 9.9
CSNK1G3-204ENST00000508708 SYTL4Q96C24 671 aaPredicted RBP31.87■■■□□ 2.69
CSNK1G3-204ENST00000508708 LY75O60449 1722 aa31.86■■■□□ 2.69
CSNK1G3-204ENST00000508708 IL13P35225 146 aa31.86■■■□□ 2.69
CSNK1G3-204ENST00000508708 SPG7Q9UQ90 795 aa31.86■■■□□ 2.69
CSNK1G3-204ENST00000508708 CASZ1Q86V15 1759 aa31.86■■■□□ 2.69
CSNK1G3-204ENST00000508708 KDRP35968 1356 aa31.85■■■□□ 2.69
CSNK1G3-204ENST00000508708 MTHFSP49914 203 aa31.85■■■□□ 2.69
CSNK1G3-204ENST00000508708 NKX1-1Q15270 411 aaPredicted RBP31.85■■■□□ 2.69
CSNK1G3-204ENST00000508708 AEBP1Q8IUX7 1158 aa31.83■■■□□ 2.69
CSNK1G3-204ENST00000508708 LRRC4BQ9NT99 713 aa31.83■■■□□ 2.69
CSNK1G3-204ENST00000508708 COL3A1P02461 1466 aaPredicted RBP31.82■■■□□ 2.68
CSNK1G3-204ENST00000508708 ITGB4P16144 1822 aa31.82■■■□□ 2.68
CSNK1G3-204ENST00000508708 PHKG2P15735 406 aa31.79■■■□□ 2.68
CSNK1G3-204ENST00000508708 SLC15A2Q16348 729 aa31.78■■■□□ 2.68
CSNK1G3-204ENST00000508708 SLC27A3Q5K4L6 730 aa31.78■■■□□ 2.68
CSNK1G3-204ENST00000508708 STK32BQ9NY57 414 aa31.77■■■□□ 2.68
CSNK1G3-204ENST00000508708 IFNL2Q8IZJ0 200 aa31.76■■■□□ 2.67
CSNK1G3-204ENST00000508708 SULT6B1Q6IMI4 303 aa31.75■■■□□ 2.67
CSNK1G3-204ENST00000508708 CNGB1Q14028 1251 aaPredicted RBP31.74■■■□□ 2.67
CSNK1G3-204ENST00000508708 ZNF827Q17R98 1081 aa31.74■■■□□ 2.67
CSNK1G3-204ENST00000508708 PDGFDQ9GZP0 370 aaPredicted RBP31.74■■■□□ 2.67
CSNK1G3-204ENST00000508708 MPRIPQ6WCQ1 1025 aa31.73■■■□□ 2.67
CSNK1G3-204ENST00000508708 PLEKHO1Q53GL0 409 aaPredicted RBP31.71■■■□□ 2.67
CSNK1G3-204ENST00000508708 PALLDQ8WX93 1383 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 QSER1Q2KHR3 1735 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 KDM6AO15550 1401 aaPredicted RBP31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 KCNQ4P56696 695 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 AMOTQ4VCS5 1084 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 PIGBQ92521 554 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 AKT1S1Q96B36 256 aa31.7■■■□□ 2.67
CSNK1G3-204ENST00000508708 DIAPH1O60610 1272 aaKnown RBP31.69■■■□□ 2.66
CSNK1G3-204ENST00000508708 CCNL1Q9UK58 526 aaPredicted RBP31.68■■■□□ 2.66
CSNK1G3-204ENST00000508708 TUBGCP6Q96RT7 1819 aa31.68■■■□□ 2.66
CSNK1G3-204ENST00000508708 ZNF530Q6P9A1 599 aaPredicted RBP31.67■■■□□ 2.66
CSNK1G3-204ENST00000508708 C5P01031 1676 aa31.66■■■□□ 2.66
CSNK1G3-204ENST00000508708 SPON1Q9HCB6 807 aa31.64■■■□□ 2.66
CSNK1G3-204ENST00000508708 TMOD3Q9NYL9 352 aa31.64■■■□□ 2.66
CSNK1G3-204ENST00000508708 TAF1LQ8IZX4 1826 aa31.63■■■□□ 2.65
CSNK1G3-204ENST00000508708 HSP90AB1P08238 724 aaKnown RBP31.63■■■□□ 2.65
CSNK1G3-204ENST00000508708 HMOX1P09601 288 aa31.63■■■□□ 2.65
CSNK1G3-204ENST00000508708 DCAF5Q96JK2 942 aa31.63■■■□□ 2.65
CSNK1G3-204ENST00000508708 PPP2R1AP30153 589 aa31.62■■■□□ 2.65
CSNK1G3-204ENST00000508708 SMARCC1Q92922 1105 aaPredicted RBP31.62■■■□□ 2.65
CSNK1G3-204ENST00000508708 ERVV-2B6SEH9 535 aa31.6■■■□□ 2.65
CSNK1G3-204ENST00000508708 ZBTB7AO95365 584 aa31.6■■■□□ 2.65
CSNK1G3-204ENST00000508708 PNPLA7Q6ZV29 1317 aa31.59■■■□□ 2.65
CSNK1G3-204ENST00000508708 PTGER2P43116 358 aa31.57■■■□□ 2.64
CSNK1G3-204ENST00000508708 C1orf141Q5JVX7 400 aa31.57■■■□□ 2.64
CSNK1G3-204ENST00000508708 ASAP1Q9ULH1 1129 aa31.57■■■□□ 2.64
CSNK1G3-204ENST00000508708 SCN11AQ9UI33 1791 aa31.57■■■□□ 2.64
CSNK1G3-204ENST00000508708 ATG3Q9NT62 314 aa31.56■■■□□ 2.64
CSNK1G3-204ENST00000508708 C4BP0C0L5 1744 aa31.55■■■□□ 2.64
CSNK1G3-204ENST00000508708 ADAMTS7Q9UKP4 1686 aa31.55■■■□□ 2.64
CSNK1G3-204ENST00000508708 MTFR1LQ9H019 292 aa31.55■■■□□ 2.64
CSNK1G3-204ENST00000508708 MRC1P22897 1456 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 LOC102724428A0A0B4J2F2 783 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 SIK1P57059 783 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 AKAP4Q5JQC9 854 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 SGIP1Q9BQI5 828 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 TFCP2L1Q9NZI6 479 aa31.53■■■□□ 2.64
CSNK1G3-204ENST00000508708 COL24A1Q17RW2 1714 aa31.52■■■□□ 2.64
CSNK1G3-204ENST00000508708 U2SURPO15042 1029 aaKnown RBP31.52■■■□□ 2.64
CSNK1G3-204ENST00000508708 CFAP53Q96M91 514 aa31.52■■■□□ 2.64
CSNK1G3-204ENST00000508708 MTHFSDQ2M296 383 aaKnown RBP31.51■■■□□ 2.63
CSNK1G3-204ENST00000508708 ATF5Q9Y2D1 282 aaPredicted RBP31.51■■■□□ 2.63
CSNK1G3-204ENST00000508708 ZNF831Q5JPB2 1677 aa31.51■■■□□ 2.63
CSNK1G3-204ENST00000508708 CABP4P57796 275 aa31.49■■■□□ 2.63
CSNK1G3-204ENST00000508708 VIRMAQ69YN4 1812 aaKnown RBP31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms