RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
CAST-222ENST00000508579 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
CAST-222ENST00000508579 CBX1P83916 185 aa10.01□□□□□ -0.81
CAST-222ENST00000508579 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
CAST-222ENST00000508579 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
CAST-222ENST00000508579 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
CAST-222ENST00000508579 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
CAST-222ENST00000508579 SYAP1Q96A49 352 aaPredicted RBP10.01□□□□□ -0.81
CAST-222ENST00000508579 KINO60870 393 aaKnown RBP10□□□□□ -0.81
CAST-222ENST00000508579 TPPPO94811 219 aa10□□□□□ -0.81
CAST-222ENST00000508579 PPP2R5AQ15172 486 aa10□□□□□ -0.81
CAST-222ENST00000508579 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
CAST-222ENST00000508579 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
CAST-222ENST00000508579 ZSCAN30Q86W11 494 aa10□□□□□ -0.81
CAST-222ENST00000508579 PDILTQ8N807 584 aa10□□□□□ -0.81
CAST-222ENST00000508579 PCDHGA4Q9Y5G9 962 aa10□□□□□ -0.81
CAST-222ENST00000508579 CAND2O75155 1236 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 PARNO95453 639 aaKnown RBP9.99□□□□□ -0.81
CAST-222ENST00000508579 PDCD2Q16342 344 aaPredicted RBP9.99□□□□□ -0.81
CAST-222ENST00000508579 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 LARP1BQ659C4 914 aaKnown RBP9.99□□□□□ -0.81
CAST-222ENST00000508579 TRIM74Q86UV6 250 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 TRIM73Q86UV7 250 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 SEZ6LQ9BYH1 1024 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 IRAK4Q9NWZ3 460 aa9.99□□□□□ -0.81
CAST-222ENST00000508579 FAM163BP0C2L3 166 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 ADCY2Q08462 1091 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 TMED1Q13445 227 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 HS1BP3Q53T59 392 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 FMNL2Q96PY5 1086 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 INO80BQ9C086 356 aaPredicted RBP9.98□□□□□ -0.81
CAST-222ENST00000508579 ODF2LQ9ULJ1 636 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 RBM47A0AV96 593 aaKnown RBP9.98□□□□□ -0.81
CAST-222ENST00000508579 IGHDP01880 384 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 ATICP31939 592 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 AP1ARQ63HQ0 302 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 UBXN4Q92575 508 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 SLX1AQ9BQ83 275 aa9.98□□□□□ -0.81
CAST-222ENST00000508579 RWDD1Q9H446 243 aaPredicted RBP9.98□□□□□ -0.81
CAST-222ENST00000508579 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 TNNT1P13805 278 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 CCDC15Q0P6D6 951 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 CHAF1AQ13111 956 aaPredicted RBP9.97□□□□□ -0.81
CAST-222ENST00000508579 E2F5Q15329 346 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 SPDYE2Q495Y8 402 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 CCDC70Q6NSX1 233 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 MICALL1Q8N3F8 863 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
CAST-222ENST00000508579 SCRIBQ14160 1630 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 SHTN1A0MZ66 631 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 OATP04181 439 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
CAST-222ENST00000508579 IMPDH2P12268 514 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 MSNP26038 577 aaKnown RBP9.96□□□□□ -0.81
CAST-222ENST00000508579 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
CAST-222ENST00000508579 NUTM2GQ5VZR2 741 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.81
CAST-222ENST00000508579 PAGR1Q9BTK6 254 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 OGFRQ9NZT2 677 aa9.96□□□□□ -0.81
CAST-222ENST00000508579 PPP1R1BQ9UD71 204 aaPredicted RBP9.96□□□□□ -0.81
CAST-222ENST00000508579 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.81
CAST-222ENST00000508579 BAZ1BQ9UIG0 1483 aaKnown RBP9.96□□□□□ -0.82
CAST-222ENST00000508579 CDKL5O76039 1030 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 FOSL1P15407 271 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 VCAM1P19320 739 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 SESN3P58005 492 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 PCGF5Q86SE9 256 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 ATP1B4Q9UN42 357 aaPredicted RBP9.96□□□□□ -0.82
CAST-222ENST00000508579 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 FAN1Q9Y2M0 1017 aa9.96□□□□□ -0.82
CAST-222ENST00000508579 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
CAST-222ENST00000508579 RWDD2BP57060 319 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 FLIIQ13045 1269 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 UBE2Q1Q7Z7E8 422 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
CAST-222ENST00000508579 PDCL2Q8N4E4 241 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 TATDN2Q93075 761 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 MAP3K20Q9NYL2 800 aaKnown RBP9.95□□□□□ -0.82
CAST-222ENST00000508579 IQSEC3Q9UPP2 1182 aaPredicted RBP9.95□□□□□ -0.82
CAST-222ENST00000508579 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
CAST-222ENST00000508579 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAST-222ENST00000508579 GOLGA3Q08378 1498 aa9.95□□□□□ -0.82
CAST-222ENST00000508579 MS4A1P11836 297 aa9.94□□□□□ -0.82
CAST-222ENST00000508579 ATP2B1P20020 1258 aa9.94□□□□□ -0.82
CAST-222ENST00000508579 CCDC92Q53HC0 331 aaPredicted RBP9.94□□□□□ -0.82
CAST-222ENST00000508579 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
CAST-222ENST00000508579 RBM12BQ8IXT5 1001 aaKnown RBP9.94□□□□□ -0.82
CAST-222ENST00000508579 EFCAB13Q8IY85 973 aa9.94□□□□□ -0.82
CAST-222ENST00000508579 PHC3Q8NDX5 983 aa9.94□□□□□ -0.82
CAST-222ENST00000508579 ENOX1Q8TC92 643 aaKnown RBP9.94□□□□□ -0.82
CAST-222ENST00000508579 TMOD4Q9NZQ9 345 aa9.94□□□□□ -0.82
CAST-222ENST00000508579 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
CAST-222ENST00000508579 JRKLQ9Y4A0 524 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms