RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CT47A1Q5JQC4 288 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 TTC31Q49AM3 519 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 GPRASP1Q5JY77 1395 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 MAP3K1Q13233 1512 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 SLU7O95391 586 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 RARSP54136 660 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 SMC5Q8IY18 1101 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 IGF1RP08069 1367 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 KIF4BQ2VIQ3 1234 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 ARFGAP3Q9NP61 516 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 EHBP1L1Q8N3D4 1523 aa8.57□□□□□ -1.04
UBE2D3-224ENST00000508474 TOP1P11387 765 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 RAB3GAP1Q15042 981 aa8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 STX1AQ16623 288 aa8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 IMMTQ16891 758 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 SART3Q15020 963 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 CAMK4Q16566 473 aa8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 EFCAB5A4FU69 1503 aa8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 NGDNQ8NEJ9 315 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 JAKMIP1Q96N16 626 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-224ENST00000508474 A0A1B0GUL7 405 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 MYRIPQ8NFW9 859 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 SKAP1Q86WV1 359 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 PDS5BQ9NTI5 1447 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 ABCC11Q96J66 1382 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 CDKL5O76039 1030 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 CSB-PGBD3P0DP91 1061 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 RNF187Q5TA31 235 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 ANKRD18AQ8IVF6 992 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 TRMT1Q9NXH9 659 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 LIMCH1Q9UPQ0 1083 aa8.55□□□□□ -1.04
UBE2D3-224ENST00000508474 MX1P20591 662 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 VPS53Q5VIR6 699 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 TUBBP07437 444 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 ZNF165P49910 485 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 CADPSQ9ULU8 1353 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 ENOX2Q16206 610 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 TAF4BQ92750 862 aa8.54□□□□□ -1.04
UBE2D3-224ENST00000508474 HMOX1P09601 288 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 PRKAR2BP31323 418 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 TDO2P48775 406 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 UTP14CQ5TAP6 766 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 CASTP20810 708 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 STK3Q13188 491 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 STX6O43752 255 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 GBP2P32456 591 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 STK11IPQ8N1F8 1099 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 RSPH14Q9UHP6 348 aa8.53□□□□□ -1.04
UBE2D3-224ENST00000508474 PRIM1P49642 420 aaKnown RBP8.52□□□□□ -1.04
UBE2D3-224ENST00000508474 SEPT7Q16181 437 aaKnown RBP8.52□□□□□ -1.04
UBE2D3-224ENST00000508474 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.04
UBE2D3-224ENST00000508474 IGHDP01880 384 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 NAIPQ13075 1403 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 ANKRD30BQ9BXX2 1392 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 TAX1BP1Q86VP1 789 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 SKILP12757 684 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 CAPN2P17655 700 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 HSPA4P34932 840 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 PAFAH1B1P43034 410 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 TMC6Q7Z403 805 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 ERO1AQ96HE7 468 aa8.52□□□□□ -1.05
UBE2D3-224ENST00000508474 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
UBE2D3-224ENST00000508474 SPA17Q15506 151 aa8.51□□□□□ -1.05
UBE2D3-224ENST00000508474 CCDC186Q7Z3E2 898 aa8.51□□□□□ -1.05
UBE2D3-224ENST00000508474 LTV1Q96GA3 475 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-224ENST00000508474 ATAD2BQ9ULI0 1458 aa8.51□□□□□ -1.05
UBE2D3-224ENST00000508474 SMC1AQ14683 1233 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms