RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 CFAP44Q96MT7 982 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 UBAP1LF5GYI3 381 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 AMOTQ4VCS5 1084 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
SPSB4-203ENST00000508126 MCM10Q7L590 875 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 COL16A1Q07092 1604 aaPredicted RBP21.02■□□□□ 0.95
SPSB4-203ENST00000508126 EXOSC9Q06265 439 aaKnown RBP21.01■□□□□ 0.95
SPSB4-203ENST00000508126 RAPGEF4Q8WZA2 1011 aa20.99■□□□□ 0.95
SPSB4-203ENST00000508126 PLEKHG2Q9H7P9 1386 aa20.99■□□□□ 0.95
SPSB4-203ENST00000508126 COL5A2P05997 1499 aaPredicted RBP20.99■□□□□ 0.95
SPSB4-203ENST00000508126 RARSP54136 660 aaKnown RBP20.98■□□□□ 0.95
SPSB4-203ENST00000508126 MBIPQ9NS73 344 aa20.98■□□□□ 0.95
SPSB4-203ENST00000508126 WDR17Q8IZU2 1322 aa20.98■□□□□ 0.95
SPSB4-203ENST00000508126 CRB1P82279 1406 aa20.98■□□□□ 0.95
SPSB4-203ENST00000508126 LRRC37A3O60309 1634 aa20.97■□□□□ 0.95
SPSB4-203ENST00000508126 PLIN1O60240 522 aa20.97■□□□□ 0.95
SPSB4-203ENST00000508126 ZNF530Q6P9A1 599 aaPredicted RBP20.97■□□□□ 0.95
SPSB4-203ENST00000508126 BCAR3O75815 825 aa20.96■□□□□ 0.95
SPSB4-203ENST00000508126 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
SPSB4-203ENST00000508126 AKAP4Q5JQC9 854 aa20.95■□□□□ 0.94
SPSB4-203ENST00000508126 C1orf141Q5JVX7 400 aa20.95■□□□□ 0.94
SPSB4-203ENST00000508126 CHL1O00533 1208 aa20.94■□□□□ 0.94
SPSB4-203ENST00000508126 TOM1L2Q6ZVM7 507 aa20.94■□□□□ 0.94
SPSB4-203ENST00000508126 CERKQ8TCT0 537 aa20.94■□□□□ 0.94
SPSB4-203ENST00000508126 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
SPSB4-203ENST00000508126 PPP4R2Q9NY27 417 aa20.94■□□□□ 0.94
SPSB4-203ENST00000508126 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
SPSB4-203ENST00000508126 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
SPSB4-203ENST00000508126 MEGF6O75095 1541 aa20.93■□□□□ 0.94
SPSB4-203ENST00000508126 EVA1CP58658 441 aa20.92■□□□□ 0.94
SPSB4-203ENST00000508126 IL17REQ8NFR9 667 aa20.92■□□□□ 0.94
SPSB4-203ENST00000508126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.92■□□□□ 0.94
SPSB4-203ENST00000508126 STRN4Q9NRL3 753 aa20.91■□□□□ 0.94
SPSB4-203ENST00000508126 SMC4Q9NTJ3 1288 aa20.91■□□□□ 0.94
SPSB4-203ENST00000508126 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
SPSB4-203ENST00000508126 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
SPSB4-203ENST00000508126 CARD10Q9BWT7 1032 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 OVOS2A0A0G2JMS6 1433 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
SPSB4-203ENST00000508126 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
SPSB4-203ENST00000508126 BTG4Q9NY30 223 aa20.89■□□□□ 0.93
SPSB4-203ENST00000508126 SSH1Q8WYL5 1049 aa20.88■□□□□ 0.93
SPSB4-203ENST00000508126 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
SPSB4-203ENST00000508126 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
SPSB4-203ENST00000508126 TAF7Q15545 349 aaPredicted RBP20.87■□□□□ 0.93
SPSB4-203ENST00000508126 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
SPSB4-203ENST00000508126 VAMP4O75379 141 aa20.87■□□□□ 0.93
SPSB4-203ENST00000508126 PDE3AQ14432 1141 aa20.87■□□□□ 0.93
SPSB4-203ENST00000508126 C20orf194Q5TEA3 1177 aa20.87■□□□□ 0.93
SPSB4-203ENST00000508126 LARP1Q6PKG0 1096 aaKnown RBP20.87■□□□□ 0.93
SPSB4-203ENST00000508126 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
SPSB4-203ENST00000508126 KIF16BQ96L93 1317 aa20.86■□□□□ 0.93
SPSB4-203ENST00000508126 TEFQ10587 303 aa20.86■□□□□ 0.93
SPSB4-203ENST00000508126 TSPYL6Q8N831 410 aa20.86■□□□□ 0.93
SPSB4-203ENST00000508126 C8orf58Q8NAV2 365 aa20.86■□□□□ 0.93
SPSB4-203ENST00000508126 CRBNQ96SW2 442 aa20.86■□□□□ 0.93
SPSB4-203ENST00000508126 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
SPSB4-203ENST00000508126 ELL2O00472 640 aaPredicted RBP20.85■□□□□ 0.93
SPSB4-203ENST00000508126 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
SPSB4-203ENST00000508126 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
SPSB4-203ENST00000508126 MIS18AQ9NYP9 233 aa20.85■□□□□ 0.93
SPSB4-203ENST00000508126 ZKSCAN2Q63HK3 967 aa20.84■□□□□ 0.93
SPSB4-203ENST00000508126 IFNL2Q8IZJ0 200 aa20.84■□□□□ 0.93
SPSB4-203ENST00000508126 JCADQ9P266 1359 aa20.83■□□□□ 0.93
SPSB4-203ENST00000508126 ADAMTS2O95450 1211 aa20.83■□□□□ 0.93
SPSB4-203ENST00000508126 IL2RBP14784 551 aa20.83■□□□□ 0.93
SPSB4-203ENST00000508126 PHKG2P15735 406 aa20.83■□□□□ 0.93
SPSB4-203ENST00000508126 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.92
SPSB4-203ENST00000508126 MS4A1P11836 297 aa20.82■□□□□ 0.92
SPSB4-203ENST00000508126 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
SPSB4-203ENST00000508126 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
SPSB4-203ENST00000508126 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
SPSB4-203ENST00000508126 BRPF1P55201 1214 aaPredicted RBP20.82■□□□□ 0.92
SPSB4-203ENST00000508126 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
SPSB4-203ENST00000508126 PLCH1Q4KWH8 1693 aa20.82■□□□□ 0.92
SPSB4-203ENST00000508126 IPO8O15397 1037 aaKnown RBP20.81■□□□□ 0.92
SPSB4-203ENST00000508126 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
SPSB4-203ENST00000508126 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
SPSB4-203ENST00000508126 SOS1Q07889 1333 aaPredicted RBP20.8■□□□□ 0.92
SPSB4-203ENST00000508126 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
SPSB4-203ENST00000508126 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
SPSB4-203ENST00000508126 ZCRB1Q8TBF4 217 aaKnown RBP20.8■□□□□ 0.92
SPSB4-203ENST00000508126 CCDC136Q96JN2 1154 aa20.8■□□□□ 0.92
SPSB4-203ENST00000508126 VIRMAQ69YN4 1812 aaKnown RBP20.79■□□□□ 0.92
SPSB4-203ENST00000508126 CYP27B1O15528 508 aa20.79■□□□□ 0.92
SPSB4-203ENST00000508126 FTSJ3Q8IY81 847 aaKnown RBP20.79■□□□□ 0.92
SPSB4-203ENST00000508126 DCAF5Q96JK2 942 aa20.79■□□□□ 0.92
SPSB4-203ENST00000508126 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
SPSB4-203ENST00000508126 MRPL50Q8N5N7 158 aaKnown RBP20.78■□□□□ 0.92
SPSB4-203ENST00000508126 NOB1Q9ULX3 412 aaKnown RBP20.78■□□□□ 0.92
SPSB4-203ENST00000508126 BTBD11A6QL63 1104 aa20.77■□□□□ 0.92
SPSB4-203ENST00000508126 ATF7IPQ6VMQ6 1270 aa20.77■□□□□ 0.92
SPSB4-203ENST00000508126 PANK1Q8TE04 598 aa20.77■□□□□ 0.92
SPSB4-203ENST00000508126 USP35Q9P2H5 1018 aa20.77■□□□□ 0.92
SPSB4-203ENST00000508126 KDM3BQ7LBC6 1761 aa20.77■□□□□ 0.92
SPSB4-203ENST00000508126 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms