RNA–Protein interactions for RNA: ENST00000507706.5

TCP11-223, Transcript of t-complex 11, human

TSL 5

Gene TCP11, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-223	ENST00000507706	LTN1	O94822	1766 aa		13.12	□□□□□ -0.31
TCP11-223	ENST00000507706	GNAT3	A8MTJ3	354 aa		13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	CHL1	O00533	1208 aa		13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	MTHFSD	Q2M296	383 aa	Known RBP	13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	AMOT	Q4VCS5	1084 aa		13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	BRINP3	Q76B58	766 aa		13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	SMC4	Q9NTJ3	1288 aa		13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	LAS1L	Q9Y4W2	734 aa	Known RBP	13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	SOS1	Q07889	1333 aa	Predicted RBP	13.11	□□□□□ -0.31
TCP11-223	ENST00000507706	PXDN	Q92626	1479 aa		13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	KIAA0232	Q92628	1395 aa		13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	LTV1	Q96GA3	475 aa	Predicted RBP	13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	CHMP4B	Q9H444	224 aa	Known RBP	13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	MBIP	Q9NS73	344 aa		13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	XIRP1	Q702N8	1843 aa	Known RBP	13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	SOS2	Q07890	1332 aa	Predicted RBP	13.1	□□□□□ -0.31
TCP11-223	ENST00000507706	DLG5	Q8TDM6	1919 aa		13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	NCAPD2	Q15021	1401 aa		13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	C20orf194	Q5TEA3	1177 aa		13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	ARHGAP45	Q92619	1136 aa		13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	FRAT1	Q92837	279 aa	Predicted RBP	13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	CHMP4A	Q9BY43	222 aa		13.09	□□□□□ -0.31
TCP11-223	ENST00000507706	CPD	O75976	1380 aa		13.08	□□□□□ -0.31
TCP11-223	ENST00000507706	VAMP4	O75379	141 aa		13.08	□□□□□ -0.32
TCP11-223	ENST00000507706	NBPF6	Q5VWK0	638 aa		13.08	□□□□□ -0.32
TCP11-223	ENST00000507706	ANKRD24	Q8TF21	1146 aa		13.08	□□□□□ -0.32
TCP11-223	ENST00000507706	SSH1	Q8WYL5	1049 aa		13.08	□□□□□ -0.32
TCP11-223	ENST00000507706	NBPF4	Q96M43	638 aa		13.08	□□□□□ -0.32
TCP11-223	ENST00000507706	MED1	Q15648	1581 aa	Predicted RBP	13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	ZBTB7C	A1YPR0	619 aa		13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	TWISTNB	Q3B726	338 aa	Predicted RBP	13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	ATF7IP	Q6VMQ6	1270 aa		13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	DZIP1L	Q8IYY4	767 aa	Known RBP	13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	THUMPD2	Q9BTF0	503 aa	Known RBP	13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	MAP3K5	Q99683	1374 aa		13.07	□□□□□ -0.32
TCP11-223	ENST00000507706	CRB1	P82279	1406 aa		13.06	□□□□□ -0.32
TCP11-223	ENST00000507706	FAM83G	A6ND36	823 aa		13.06	□□□□□ -0.32
TCP11-223	ENST00000507706	FTSJ3	Q8IY81	847 aa	Known RBP	13.06	□□□□□ -0.32
TCP11-223	ENST00000507706	DCTN1	Q14203	1278 aa		13.05	□□□□□ -0.32
TCP11-223	ENST00000507706	MCM10	Q7L590	875 aa		13.05	□□□□□ -0.32
TCP11-223	ENST00000507706	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
TCP11-223	ENST00000507706	ERBB3	P21860	1342 aa		13.05	□□□□□ -0.32
TCP11-223	ENST00000507706	ZC3H6	P61129	1189 aa	Known RBP	13.04	□□□□□ -0.32
TCP11-223	ENST00000507706	TAF7	Q15545	349 aa	Predicted RBP	13.04	□□□□□ -0.32
TCP11-223	ENST00000507706	AKAP4	Q5JQC9	854 aa		13.04	□□□□□ -0.32
TCP11-223	ENST00000507706	CLUAP1	Q96AJ1	413 aa		13.04	□□□□□ -0.32
TCP11-223	ENST00000507706	DDX19B	Q9UMR2	479 aa		13.04	□□□□□ -0.32
TCP11-223	ENST00000507706	MVP	Q14764	893 aa	Known RBP	13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	MRPL50	Q8N5N7	158 aa	Known RBP	13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	C8orf58	Q8NAV2	365 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	PANK1	Q8TE04	598 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	BCL2L13	Q9BXK5	485 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	API5	Q9BZZ5	524 aa	Known RBP	13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	TSPYL4	Q9UJ04	414 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	NOB1	Q9ULX3	412 aa	Known RBP	13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	COG6	Q9Y2V7	657 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	OVOS2	A0A0G2JMS6	1433 aa		13.03	□□□□□ -0.32
TCP11-223	ENST00000507706	TCERG1	O14776	1098 aa	Known RBP	13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	ABCB7	O75027	752 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	TRIM27	P14373	513 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	C1orf141	Q5JVX7	400 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	RAPGEF4	Q8WZA2	1011 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	DDX17	Q92841	729 aa	Known RBP	13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	AXIN2	Q9Y2T1	843 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	CAMTA1	Q9Y6Y1	1673 aa		13.02	□□□□□ -0.33
TCP11-223	ENST00000507706	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.01	□□□□□ -0.33
TCP11-223	ENST00000507706	LRRC59	Q96AG4	307 aa	Known RBP	13.01	□□□□□ -0.33
TCP11-223	ENST00000507706	CEMIP	Q8WUJ3	1361 aa		13.01	□□□□□ -0.33
TCP11-223	ENST00000507706	FAM208A	Q9UK61	1670 aa	Known RBP	13.01	□□□□□ -0.33
TCP11-223	ENST00000507706	PTPRC	P08575	1304 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	KDM2B	Q8NHM5	1336 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	TAT	P17735	454 aa	Predicted RBP	13	□□□□□ -0.33
TCP11-223	ENST00000507706	USHBP1	Q8N6Y0	703 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	TSPYL6	Q8N831	410 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	IL17RE	Q8NFR9	667 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	TSHZ2	Q9NRE2	1034 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	NLRP2	Q9NX02	1062 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	SPG7	Q9UQ90	795 aa		13	□□□□□ -0.33
TCP11-223	ENST00000507706	HOXB7	P09629	217 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	CSB-PGBD3	P0DP91	1061 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	RWDD1	Q9H446	243 aa	Predicted RBP	12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	PRDM11	Q9NQV5	511 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	COL18A1	P39060	1754 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	LRRC37A3	O60309	1634 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	NHSL1	Q5SYE7	1610 aa		12.99	□□□□□ -0.33
TCP11-223	ENST00000507706	RLBP1	P12271	317 aa		12.98	□□□□□ -0.33
TCP11-223	ENST00000507706	TEF	Q10587	303 aa		12.98	□□□□□ -0.33
TCP11-223	ENST00000507706	CABLES1	Q8TDN4	633 aa		12.98	□□□□□ -0.33
TCP11-223	ENST00000507706	CRYBG1	Q9Y4K1	1723 aa		12.98	□□□□□ -0.33
TCP11-223	ENST00000507706	LMO7	Q8WWI1	1683 aa		12.98	□□□□□ -0.33
TCP11-223	ENST00000507706	ELL2	O00472	640 aa	Predicted RBP	12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	PLEKHG5	O94827	1062 aa		12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	HSP90AB1	P08238	724 aa	Known RBP	12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	POLA2	Q14181	598 aa		12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	CCDC30	Q5VVM6	783 aa		12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	STK31	Q9BXU1	1019 aa		12.97	□□□□□ -0.33
TCP11-223	ENST00000507706	RNMT	O43148	476 aa	Known RBP	12.96	□□□□□ -0.33
TCP11-223	ENST00000507706	ITPRIP	Q8IWB1	547 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms