RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 BTAF1O14981 1849 aa22■■□□□ 1.11
SSBP2-207ENST00000507472 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
SSBP2-207ENST00000507472 ZNF827Q17R98 1081 aa21.99■■□□□ 1.11
SSBP2-207ENST00000507472 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
SSBP2-207ENST00000507472 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
SSBP2-207ENST00000507472 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
SSBP2-207ENST00000507472 SLC27A3Q5K4L6 730 aa21.98■■□□□ 1.11
SSBP2-207ENST00000507472 POLR3GLQ9BT43 218 aa21.98■■□□□ 1.11
SSBP2-207ENST00000507472 CGNL1Q0VF96 1302 aa21.98■■□□□ 1.11
SSBP2-207ENST00000507472 FLT4P35916 1363 aa21.98■■□□□ 1.11
SSBP2-207ENST00000507472 TATP17735 454 aaPredicted RBP21.97■■□□□ 1.11
SSBP2-207ENST00000507472 KCNQ4P56696 695 aa21.97■■□□□ 1.11
SSBP2-207ENST00000507472 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
SSBP2-207ENST00000507472 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
SSBP2-207ENST00000507472 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
SSBP2-207ENST00000507472 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
SSBP2-207ENST00000507472 SGIP1Q9BQI5 828 aa21.95■■□□□ 1.1
SSBP2-207ENST00000507472 NSD2O96028 1365 aa21.94■■□□□ 1.1
SSBP2-207ENST00000507472 MYOM1P52179 1685 aa21.93■■□□□ 1.1
SSBP2-207ENST00000507472 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSBP2-207ENST00000507472 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
SSBP2-207ENST00000507472 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
SSBP2-207ENST00000507472 KIF20BQ96Q89 1820 aa21.93■■□□□ 1.1
SSBP2-207ENST00000507472 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
SSBP2-207ENST00000507472 FHDC1Q9C0D6 1143 aaPredicted RBP21.92■■□□□ 1.1
SSBP2-207ENST00000507472 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
SSBP2-207ENST00000507472 WASHC2AQ641Q2 1341 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 PCDH11XQ9BZA7 1347 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 PCDH11YQ9BZA8 1340 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 SHANK3Q9BYB0 1731 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 YY1P25490 414 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
SSBP2-207ENST00000507472 CYP27B1O15528 508 aa21.89■■□□□ 1.09
SSBP2-207ENST00000507472 ARXQ96QS3 562 aa21.89■■□□□ 1.09
SSBP2-207ENST00000507472 POLKQ9UBT6 870 aa21.89■■□□□ 1.09
SSBP2-207ENST00000507472 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.09
SSBP2-207ENST00000507472 PNPLA7Q6ZV29 1317 aa21.88■■□□□ 1.09
SSBP2-207ENST00000507472 DOT1LQ8TEK3 1739 aa21.88■■□□□ 1.09
SSBP2-207ENST00000507472 TNNT2P45379 298 aaPredicted RBP21.87■■□□□ 1.09
SSBP2-207ENST00000507472 SLC16A10Q8TF71 515 aa21.87■■□□□ 1.09
SSBP2-207ENST00000507472 EYA1Q99502 592 aa21.87■■□□□ 1.09
SSBP2-207ENST00000507472 MPRIPQ6WCQ1 1025 aa21.86■■□□□ 1.09
SSBP2-207ENST00000507472 PANK3Q9H999 370 aa21.86■■□□□ 1.09
SSBP2-207ENST00000507472 SPG7Q9UQ90 795 aa21.83■■□□□ 1.09
SSBP2-207ENST00000507472 UTRNP46939 3433 aa21.83■■□□□ 1.09
SSBP2-207ENST00000507472 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
SSBP2-207ENST00000507472 LY75O60449 1722 aa21.81■■□□□ 1.08
SSBP2-207ENST00000507472 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
SSBP2-207ENST00000507472 NKX1-1Q15270 411 aaPredicted RBP21.81■■□□□ 1.08
SSBP2-207ENST00000507472 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
SSBP2-207ENST00000507472 POLD1P28340 1107 aa21.8■■□□□ 1.08
SSBP2-207ENST00000507472 PIGBQ92521 554 aa21.8■■□□□ 1.08
SSBP2-207ENST00000507472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSBP2-207ENST00000507472 PALLDQ8WX93 1383 aa21.79■■□□□ 1.08
SSBP2-207ENST00000507472 MSH5O43196 834 aa21.79■■□□□ 1.08
SSBP2-207ENST00000507472 COL23A1Q86Y22 540 aaPredicted RBP21.79■■□□□ 1.08
SSBP2-207ENST00000507472 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
SSBP2-207ENST00000507472 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
SSBP2-207ENST00000507472 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
SSBP2-207ENST00000507472 KLHL34Q8N239 644 aa21.76■■□□□ 1.07
SSBP2-207ENST00000507472 HMGB2P26583 209 aaKnown RBP21.75■■□□□ 1.07
SSBP2-207ENST00000507472 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
SSBP2-207ENST00000507472 QSER1Q2KHR3 1735 aa21.75■■□□□ 1.07
SSBP2-207ENST00000507472 PHKG2P15735 406 aa21.74■■□□□ 1.07
SSBP2-207ENST00000507472 MORC1Q86VD1 984 aa21.74■■□□□ 1.07
SSBP2-207ENST00000507472 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
SSBP2-207ENST00000507472 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
SSBP2-207ENST00000507472 TMOD3Q9NYL9 352 aa21.72■■□□□ 1.07
SSBP2-207ENST00000507472 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
SSBP2-207ENST00000507472 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
SSBP2-207ENST00000507472 MSL1Q68DK7 614 aa21.71■■□□□ 1.07
SSBP2-207ENST00000507472 FLAD1Q8NFF5 587 aa21.71■■□□□ 1.07
SSBP2-207ENST00000507472 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
SSBP2-207ENST00000507472 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
SSBP2-207ENST00000507472 GOLGB1Q14789 3259 aaKnown RBP21.7■■□□□ 1.07
SSBP2-207ENST00000507472 LOC102724428A0A0B4J2F2 783 aa21.7■■□□□ 1.06
SSBP2-207ENST00000507472 SIK1P57059 783 aa21.7■■□□□ 1.06
SSBP2-207ENST00000507472 GPR162Q16538 588 aa21.7■■□□□ 1.06
SSBP2-207ENST00000507472 ITGB4P16144 1822 aa21.69■■□□□ 1.06
SSBP2-207ENST00000507472 AMIGO3Q86WK7 504 aa21.69■■□□□ 1.06
SSBP2-207ENST00000507472 NLGN2Q8NFZ4 835 aa21.69■■□□□ 1.06
SSBP2-207ENST00000507472 AK7Q96M32 723 aa21.69■■□□□ 1.06
SSBP2-207ENST00000507472 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
SSBP2-207ENST00000507472 COL24A1Q17RW2 1714 aa21.68■■□□□ 1.06
SSBP2-207ENST00000507472 PLEKHO1Q53GL0 409 aaPredicted RBP21.67■■□□□ 1.06
SSBP2-207ENST00000507472 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
SSBP2-207ENST00000507472 C5P01031 1676 aa21.66■■□□□ 1.06
SSBP2-207ENST00000507472 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
SSBP2-207ENST00000507472 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
SSBP2-207ENST00000507472 PLEKHG2Q9H7P9 1386 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 KIF7Q2M1P5 1343 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 PHF14O94880 888 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 ATP6V1AP38606 617 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 ITPK1Q13572 414 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 AMER1Q5JTC6 1135 aaPredicted RBP21.65■■□□□ 1.06
SSBP2-207ENST00000507472 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
SSBP2-207ENST00000507472 ZNF784Q8NCA9 323 aaPredicted RBP21.65■■□□□ 1.06
SSBP2-207ENST00000507472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
SSBP2-207ENST00000507472 ERVV-2B6SEH9 535 aa21.64■■□□□ 1.05
SSBP2-207ENST00000507472 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms