RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 GNAT3A8MTJ3 354 aa10.03□□□□□ -0.8
SMAD1-206ENST00000507367 C8orf37Q96NL8 207 aa10.03□□□□□ -0.8
SMAD1-206ENST00000507367 MAP3K5Q99683 1374 aa10.02□□□□□ -0.8
SMAD1-206ENST00000507367 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.8
SMAD1-206ENST00000507367 IL2RBP14784 551 aa10.02□□□□□ -0.81
SMAD1-206ENST00000507367 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
SMAD1-206ENST00000507367 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
SMAD1-206ENST00000507367 ZNF530Q6P9A1 599 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-206ENST00000507367 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.81
SMAD1-206ENST00000507367 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-206ENST00000507367 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
SMAD1-206ENST00000507367 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.81
SMAD1-206ENST00000507367 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
SMAD1-206ENST00000507367 HSP90AB1P08238 724 aaKnown RBP10.01□□□□□ -0.81
SMAD1-206ENST00000507367 GNAI1P63096 354 aa10.01□□□□□ -0.81
SMAD1-206ENST00000507367 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
SMAD1-206ENST00000507367 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
SMAD1-206ENST00000507367 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
SMAD1-206ENST00000507367 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
SMAD1-206ENST00000507367 UNC5CLQ8IV45 518 aa10□□□□□ -0.81
SMAD1-206ENST00000507367 IFT57Q9NWB7 429 aa10□□□□□ -0.81
SMAD1-206ENST00000507367 USP35Q9P2H5 1018 aa10□□□□□ -0.81
SMAD1-206ENST00000507367 PCDH11XQ9BZA7 1347 aa10□□□□□ -0.81
SMAD1-206ENST00000507367 PCDH11YQ9BZA8 1340 aa10□□□□□ -0.81
SMAD1-206ENST00000507367 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 SLIT2O94813 1529 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 FNBP4Q8N3X1 1017 aaPredicted RBP9.99□□□□□ -0.81
SMAD1-206ENST00000507367 FBXO41Q8TF61 875 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 USP21Q9UK80 565 aa9.99□□□□□ -0.81
SMAD1-206ENST00000507367 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
SMAD1-206ENST00000507367 MEGF6O75095 1541 aa9.98□□□□□ -0.81
SMAD1-206ENST00000507367 TEFQ10587 303 aa9.98□□□□□ -0.81
SMAD1-206ENST00000507367 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
SMAD1-206ENST00000507367 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
SMAD1-206ENST00000507367 BABAM1Q9NWV8 329 aa9.98□□□□□ -0.81
SMAD1-206ENST00000507367 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 LRP6O75581 1613 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 NRAPQ86VF7 1730 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 NEFLP07196 543 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 CT47B1P0C2W7 299 aaPredicted RBP9.97□□□□□ -0.81
SMAD1-206ENST00000507367 VPS72Q15906 364 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 DUSP27Q5VZP5 1158 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 MCM10Q7L590 875 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 TRMT2AQ8IZ69 625 aaKnown RBP9.97□□□□□ -0.81
SMAD1-206ENST00000507367 SPATA31A1Q5TZJ5 1347 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 SPATA31A5Q5VU36 1347 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 SPATA31A7Q8IWB4 1347 aa9.97□□□□□ -0.81
SMAD1-206ENST00000507367 EXOC5O00471 708 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 PHKG2P15735 406 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 DCTN1Q14203 1278 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 DCAF5Q96JK2 942 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 PKD1L3Q7Z443 1732 aa9.96□□□□□ -0.82
SMAD1-206ENST00000507367 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.82
SMAD1-206ENST00000507367 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-206ENST00000507367 MPRIPQ6WCQ1 1025 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-206ENST00000507367 THUMPD2Q9BTF0 503 aaKnown RBP9.95□□□□□ -0.82
SMAD1-206ENST00000507367 CHMP4AQ9BY43 222 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 TSPYL4Q9UJ04 414 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 RCAN3Q9UKA8 241 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 TRPC5Q9UL62 973 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-206ENST00000507367 AFF2P51816 1311 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 BCL9LQ86UU0 1499 aa9.95□□□□□ -0.82
SMAD1-206ENST00000507367 CEMIPQ8WUJ3 1361 aa9.94□□□□□ -0.82
SMAD1-206ENST00000507367 A0A0G2JS52 829 aa9.94□□□□□ -0.82
SMAD1-206ENST00000507367 MYT1Q01538 1121 aa9.94□□□□□ -0.82
SMAD1-206ENST00000507367 DDB1Q16531 1140 aa9.94□□□□□ -0.82
SMAD1-206ENST00000507367 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
SMAD1-206ENST00000507367 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
SMAD1-206ENST00000507367 ZNF428Q96B54 188 aa9.94□□□□□ -0.82
SMAD1-206ENST00000507367 SPINK5Q9NQ38 1064 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-206ENST00000507367 DISP2A7MBM2 1401 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 TNS2Q63HR2 1409 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 CHL1O00533 1208 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
SMAD1-206ENST00000507367 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 ZNF772Q68DY9 489 aaPredicted RBP9.93□□□□□ -0.82
SMAD1-206ENST00000507367 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
SMAD1-206ENST00000507367 SOS1Q07889 1333 aaPredicted RBP9.92□□□□□ -0.82
SMAD1-206ENST00000507367 BTBD11A6QL63 1104 aa9.92□□□□□ -0.82
SMAD1-206ENST00000507367 ERVV-2B6SEH9 535 aa9.92□□□□□ -0.82
SMAD1-206ENST00000507367 CYP27B1O15528 508 aa9.92□□□□□ -0.82
SMAD1-206ENST00000507367 CABP4P57796 275 aa9.92□□□□□ -0.82
SMAD1-206ENST00000507367 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
SMAD1-206ENST00000507367 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
SMAD1-206ENST00000507367 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
SMAD1-206ENST00000507367 NKX1-1Q15270 411 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-206ENST00000507367 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
SMAD1-206ENST00000507367 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-206ENST00000507367 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
SMAD1-206ENST00000507367 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
SMAD1-206ENST00000507367 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
SMAD1-206ENST00000507367 TWISTNBQ3B726 338 aaPredicted RBP9.9□□□□□ -0.82
SMAD1-206ENST00000507367 TTC5Q8N0Z6 440 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms