RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 SLURP2P0DP57 97 aa6.81□□□□□ -1.32
HMGB3P15-201ENST00000507326 RNF144AP50876 292 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P15-201ENST00000507326 RNF225M0QZC1 329 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P15-201ENST00000507326 RASSF7Q02833 373 aa6.8□□□□□ -1.32
HMGB3P15-201ENST00000507326 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
HMGB3P15-201ENST00000507326 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
HMGB3P15-201ENST00000507326 GDF11O95390 407 aa6.79□□□□□ -1.32
HMGB3P15-201ENST00000507326 ADAMTS2O95450 1211 aa6.79□□□□□ -1.32
HMGB3P15-201ENST00000507326 A0A1W2PRU2 124 aa6.78□□□□□ -1.32
HMGB3P15-201ENST00000507326 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
HMGB3P15-201ENST00000507326 NR1H3Q13133 447 aa6.78□□□□□ -1.32
HMGB3P15-201ENST00000507326 GAS6Q14393 721 aa6.78□□□□□ -1.32
HMGB3P15-201ENST00000507326 CC2D2BQ6DHV5 1058 aa6.78□□□□□ -1.32
HMGB3P15-201ENST00000507326 MARSP56192 900 aaKnown RBP6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 ERVK-9P63128 1117 aa6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 RIPOR1Q6ZS17 1223 aa6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 PCDHB11Q9Y5F2 797 aa6.77□□□□□ -1.33
HMGB3P15-201ENST00000507326 GPR25O00155 361 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 GPC1P35052 558 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 IRS1P35568 1242 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 SCTRP47872 440 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 SRSF11Q05519 484 aaKnown RBP6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 POU4F2Q12837 409 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 SLC27A3Q5K4L6 730 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 CCDC125Q86Z20 511 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 TRIM22Q8IYM9 498 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 NLRP3Q96P20 1036 aa6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 GAS2L1Q99501 681 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P15-201ENST00000507326 MAP3K10Q02779 954 aa6.75□□□□□ -1.33
HMGB3P15-201ENST00000507326 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P15-201ENST00000507326 GPR37L1O60883 481 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 BRPF1P55201 1214 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 MCCD1P59942 119 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 DBN1Q16643 649 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 MTMR14Q8NCE2 650 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 BANK1Q8NDB2 785 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 ARHGEF10LQ9HCE6 1279 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 NDUFB9Q9Y6M9 179 aa6.74□□□□□ -1.33
HMGB3P15-201ENST00000507326 CLN3Q13286 438 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 FOXR1Q6PIV2 292 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 ZNF592Q92610 1267 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 GMCL1Q96IK5 515 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 GRIP2Q9C0E4 1043 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 ESF1Q9H501 851 aaKnown RBP6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 SNRKQ9NRH2 765 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 RAB6BQ9NRW1 208 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
HMGB3P15-201ENST00000507326 NBPF10Q6P3W6 841 aaKnown RBP6.72□□□□□ -1.33
HMGB3P15-201ENST00000507326 NBPF15Q8N660 670 aa6.72□□□□□ -1.33
HMGB3P15-201ENST00000507326 SCARF2Q96GP6 870 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P15-201ENST00000507326 IGF1RP08069 1367 aa6.71□□□□□ -1.33
HMGB3P15-201ENST00000507326 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.34
HMGB3P15-201ENST00000507326 H7C1W4 665 aa6.71□□□□□ -1.34
HMGB3P15-201ENST00000507326 TRAK2O60296 914 aa6.71□□□□□ -1.34
HMGB3P15-201ENST00000507326 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
HMGB3P15-201ENST00000507326 TIMMDC1Q9NPL8 285 aa6.71□□□□□ -1.34
HMGB3P15-201ENST00000507326 SOCS7O14512 581 aa6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 KANK3Q6NY19 840 aa6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 TAS1R3Q7RTX0 852 aa6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 DNMT3AQ9Y6K1 912 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P15-201ENST00000507326 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 APBB1O00213 710 aa6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 WASLO00401 505 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 GPAT2Q6NUI2 795 aa6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 CCDC85AQ96PX6 553 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
HMGB3P15-201ENST00000507326 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 GNRH1P01148 92 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 IL2RAP01589 272 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 PHKA2P46019 1235 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 WDR44Q5JSH3 913 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 NEDD1Q8NHV4 660 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 CNKSR1Q969H4 720 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 NUCKS1Q9H1E3 243 aaKnown RBP6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 GPAMQ9HCL2 828 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 CEP126Q9P2H0 1117 aa6.68□□□□□ -1.34
HMGB3P15-201ENST00000507326 F11P03951 625 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 BCRP11274 1271 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 MX2P20592 715 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 CENPCQ03188 943 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 ACDQ96AP0 544 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 ESYT1Q9BSJ8 1104 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 CNTNAP5Q8WYK1 1306 aa6.67□□□□□ -1.34
HMGB3P15-201ENST00000507326 ZSCAN10Q96SZ4 725 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P15-201ENST00000507326 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
HMGB3P15-201ENST00000507326 THBS1P07996 1170 aa6.65□□□□□ -1.34
HMGB3P15-201ENST00000507326 NSFL1CQ9UNZ2 370 aaKnown RBP6.65□□□□□ -1.34
HMGB3P15-201ENST00000507326 PHF20L1A8MW92 1017 aa6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 STAU1O95793 577 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms