RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KCNH5Q8NCM2 988 aa10.63□□□□□ -0.71
VCAN-207ENST00000507162 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
VCAN-207ENST00000507162 CABP1Q9NZU7 370 aa10.63□□□□□ -0.71
VCAN-207ENST00000507162 BCS1LQ9Y276 419 aa10.63□□□□□ -0.71
VCAN-207ENST00000507162 BTAF1O14981 1849 aa10.63□□□□□ -0.71
VCAN-207ENST00000507162 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
VCAN-207ENST00000507162 COL24A1Q17RW2 1714 aa10.62□□□□□ -0.71
VCAN-207ENST00000507162 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
VCAN-207ENST00000507162 CPSF1Q10570 1443 aaKnown RBP10.61□□□□□ -0.71
VCAN-207ENST00000507162 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
VCAN-207ENST00000507162 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
VCAN-207ENST00000507162 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
VCAN-207ENST00000507162 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
VCAN-207ENST00000507162 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
VCAN-207ENST00000507162 COL18A1P39060 1754 aa10.6□□□□□ -0.71
VCAN-207ENST00000507162 PHF14O94880 888 aa10.59□□□□□ -0.71
VCAN-207ENST00000507162 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.71
VCAN-207ENST00000507162 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
VCAN-207ENST00000507162 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
VCAN-207ENST00000507162 A0A0G2JLW4 131 aa10.58□□□□□ -0.72
VCAN-207ENST00000507162 TUBGCP6Q96RT7 1819 aa10.58□□□□□ -0.72
VCAN-207ENST00000507162 FCHSD2O94868 740 aa10.57□□□□□ -0.72
VCAN-207ENST00000507162 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
VCAN-207ENST00000507162 SLIT3O75094 1523 aa10.57□□□□□ -0.72
VCAN-207ENST00000507162 RGPD5Q99666 1765 aa10.57□□□□□ -0.72
VCAN-207ENST00000507162 USP47Q96K76 1375 aa10.56□□□□□ -0.72
VCAN-207ENST00000507162 FOXN1O15353 648 aa10.56□□□□□ -0.72
VCAN-207ENST00000507162 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
VCAN-207ENST00000507162 AK7Q96M32 723 aa10.56□□□□□ -0.72
VCAN-207ENST00000507162 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
VCAN-207ENST00000507162 ABCC6O95255 1503 aa10.55□□□□□ -0.72
VCAN-207ENST00000507162 LTV1Q96GA3 475 aaPredicted RBP10.55□□□□□ -0.72
VCAN-207ENST00000507162 ERBB3P21860 1342 aa10.55□□□□□ -0.72
VCAN-207ENST00000507162 ANKRD36BQ8N2N9 1353 aa10.54□□□□□ -0.72
VCAN-207ENST00000507162 HMGB2P26583 209 aaKnown RBP10.54□□□□□ -0.72
VCAN-207ENST00000507162 DSG3P32926 999 aa10.54□□□□□ -0.72
VCAN-207ENST00000507162 PRDM10Q9NQV6 1147 aa10.54□□□□□ -0.72
VCAN-207ENST00000507162 RNF181Q9P0P0 153 aa10.54□□□□□ -0.72
VCAN-207ENST00000507162 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
VCAN-207ENST00000507162 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
VCAN-207ENST00000507162 DPEP1P16444 411 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 TGFB2P61812 414 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 AMIGO3Q86WK7 504 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 AIDAQ96BJ3 306 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
VCAN-207ENST00000507162 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
VCAN-207ENST00000507162 CCDC85CA6NKD9 419 aa10.52□□□□□ -0.73
VCAN-207ENST00000507162 MMP10P09238 476 aa10.52□□□□□ -0.73
VCAN-207ENST00000507162 ZCRB1Q8TBF4 217 aaKnown RBP10.52□□□□□ -0.73
VCAN-207ENST00000507162 NSD2O96028 1365 aa10.52□□□□□ -0.73
VCAN-207ENST00000507162 CTCFP49711 727 aaPredicted RBP10.51□□□□□ -0.73
VCAN-207ENST00000507162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.51□□□□□ -0.73
VCAN-207ENST00000507162 VEGFAP15692 232 aaPredicted RBP10.5□□□□□ -0.73
VCAN-207ENST00000507162 LBX1P52954 281 aa10.5□□□□□ -0.73
VCAN-207ENST00000507162 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
VCAN-207ENST00000507162 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
VCAN-207ENST00000507162 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
VCAN-207ENST00000507162 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
VCAN-207ENST00000507162 TTC21AQ8NDW8 1320 aa10.49□□□□□ -0.73
VCAN-207ENST00000507162 CENPJQ9HC77 1338 aaPredicted RBP10.49□□□□□ -0.73
VCAN-207ENST00000507162 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
VCAN-207ENST00000507162 KCNA4P22459 653 aa10.48□□□□□ -0.73
VCAN-207ENST00000507162 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
VCAN-207ENST00000507162 SSFA2P28290 1259 aa10.47□□□□□ -0.73
VCAN-207ENST00000507162 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
VCAN-207ENST00000507162 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
VCAN-207ENST00000507162 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
VCAN-207ENST00000507162 LY75O60449 1722 aa10.47□□□□□ -0.73
VCAN-207ENST00000507162 DALRD3Q5D0E6 543 aaKnown RBP10.46□□□□□ -0.73
VCAN-207ENST00000507162 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
VCAN-207ENST00000507162 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.73
VCAN-207ENST00000507162 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
VCAN-207ENST00000507162 C10orf71Q711Q0 1435 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 GNPATO15228 680 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 KCNA3P22001 575 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 RGS19P49795 217 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 TMF1P82094 1093 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 NME9Q86XW9 330 aa10.45□□□□□ -0.74
VCAN-207ENST00000507162 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
VCAN-207ENST00000507162 NFAT5O94916 1531 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 KTN1Q86UP2 1357 aaKnown RBP10.44□□□□□ -0.74
VCAN-207ENST00000507162 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 GLTPD2A6NH11 291 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 LINC00116Q8NCU8 138 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 IP6K1Q92551 441 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 PARP3Q9Y6F1 533 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 N4BP2Q86UW6 1770 aaPredicted RBP10.44□□□□□ -0.74
VCAN-207ENST00000507162 PDE4DIPQ5VU43 2346 aa10.44□□□□□ -0.74
VCAN-207ENST00000507162 VEGFBP49765 207 aa10.43□□□□□ -0.74
VCAN-207ENST00000507162 NSD3Q9BZ95 1437 aa10.42□□□□□ -0.74
VCAN-207ENST00000507162 RASSF7Q02833 373 aa10.42□□□□□ -0.74
VCAN-207ENST00000507162 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
VCAN-207ENST00000507162 TRAPPC3LQ5T215 181 aa10.42□□□□□ -0.74
VCAN-207ENST00000507162 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
VCAN-207ENST00000507162 DOT1LQ8TEK3 1739 aa10.41□□□□□ -0.74
VCAN-207ENST00000507162 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms