RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-213ENST00000506958 DDX54Q8TDD1 881 aaKnown RBP29.16■■■□□ 2.26
APBB3-213ENST00000506958 NHSQ6T4R5 1651 aa29.15■■■□□ 2.26
APBB3-213ENST00000506958 CAMKK2Q96RR4 588 aa29.15■■■□□ 2.26
APBB3-213ENST00000506958 EYA1Q99502 592 aa29.15■■■□□ 2.26
APBB3-213ENST00000506958 PLEKHG2Q9H7P9 1386 aa29.13■■■□□ 2.25
APBB3-213ENST00000506958 SHANK3Q9BYB0 1731 aa29.13■■■□□ 2.25
APBB3-213ENST00000506958 PCDH11XQ9BZA7 1347 aa29.13■■■□□ 2.25
APBB3-213ENST00000506958 PCDH11YQ9BZA8 1340 aa29.13■■■□□ 2.25
APBB3-213ENST00000506958 KAT6BQ8WYB5 2073 aa29.13■■■□□ 2.25
APBB3-213ENST00000506958 EZH2Q15910 746 aaKnown RBP29.12■■■□□ 2.25
APBB3-213ENST00000506958 RREB1Q92766 1687 aa29.11■■■□□ 2.25
APBB3-213ENST00000506958 PLSCR1O15162 318 aa29.1■■■□□ 2.25
APBB3-213ENST00000506958 PKD1L3Q7Z443 1732 aa29.09■■■□□ 2.25
APBB3-213ENST00000506958 IGSF1Q8N6C5 1336 aa29.09■■■□□ 2.25
APBB3-213ENST00000506958 MTHFSP49914 203 aa29.07■■■□□ 2.24
APBB3-213ENST00000506958 ACSBG1Q96GR2 724 aa29.07■■■□□ 2.24
APBB3-213ENST00000506958 SPG7Q9UQ90 795 aa29.07■■■□□ 2.24
APBB3-213ENST00000506958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.06■■■□□ 2.24
APBB3-213ENST00000506958 DOT1LQ8TEK3 1739 aa29.04■■■□□ 2.24
APBB3-213ENST00000506958 KCNQ2O43526 872 aa29.04■■■□□ 2.24
APBB3-213ENST00000506958 NUP188Q5SRE5 1749 aa29.03■■■□□ 2.24
APBB3-213ENST00000506958 CNGB1Q14028 1251 aaPredicted RBP29.03■■■□□ 2.24
APBB3-213ENST00000506958 PTF1AQ7RTS3 328 aa29.03■■■□□ 2.24
APBB3-213ENST00000506958 BTAF1O14981 1849 aa29.03■■■□□ 2.24
APBB3-213ENST00000506958 NBPF14Q5TI25 921 aa29.02■■■□□ 2.24
APBB3-213ENST00000506958 IL13P35225 146 aa29.01■■■□□ 2.23
APBB3-213ENST00000506958 SYTL4Q96C24 671 aaPredicted RBP28.99■■■□□ 2.23
APBB3-213ENST00000506958 CYP27B1O15528 508 aa28.97■■■□□ 2.23
APBB3-213ENST00000506958 DIAPH1O60610 1272 aaKnown RBP28.97■■■□□ 2.23
APBB3-213ENST00000506958 PRIM1P49642 420 aaKnown RBP28.96■■■□□ 2.23
APBB3-213ENST00000506958 AMOTQ4VCS5 1084 aa28.96■■■□□ 2.23
APBB3-213ENST00000506958 CFAP53Q96M91 514 aa28.96■■■□□ 2.23
APBB3-213ENST00000506958 KDRP35968 1356 aa28.96■■■□□ 2.23
APBB3-213ENST00000506958 PLEKHO1Q53GL0 409 aaPredicted RBP28.95■■■□□ 2.22
APBB3-213ENST00000506958 IFNL2Q8IZJ0 200 aa28.95■■■□□ 2.22
APBB3-213ENST00000506958 NKX1-1Q15270 411 aaPredicted RBP28.94■■■□□ 2.22
APBB3-213ENST00000506958 TXNRD1Q16881 649 aa28.94■■■□□ 2.22
APBB3-213ENST00000506958 SULT6B1Q6IMI4 303 aa28.94■■■□□ 2.22
APBB3-213ENST00000506958 COL3A1P02461 1466 aaPredicted RBP28.91■■■□□ 2.22
APBB3-213ENST00000506958 PSDA5PKW4 1024 aaPredicted RBP28.91■■■□□ 2.22
APBB3-213ENST00000506958 R3HDM1Q15032 1099 aaKnown RBP28.91■■■□□ 2.22
APBB3-213ENST00000506958 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
APBB3-213ENST00000506958 HSP90AB1P08238 724 aaKnown RBP28.9■■■□□ 2.22
APBB3-213ENST00000506958 PHKG2P15735 406 aa28.9■■■□□ 2.22
APBB3-213ENST00000506958 PROM2Q8N271 834 aa28.89■■■□□ 2.22
APBB3-213ENST00000506958 PPP2R1AP30153 589 aa28.88■■■□□ 2.21
APBB3-213ENST00000506958 TOGARAM1Q9Y4F4 1720 aa28.87■■■□□ 2.21
APBB3-213ENST00000506958 SLC27A3Q5K4L6 730 aa28.87■■■□□ 2.21
APBB3-213ENST00000506958 ZNF530Q6P9A1 599 aaPredicted RBP28.87■■■□□ 2.21
APBB3-213ENST00000506958 ITGB4P16144 1822 aa28.85■■■□□ 2.21
APBB3-213ENST00000506958 DDX10Q13206 875 aaKnown RBP28.85■■■□□ 2.21
APBB3-213ENST00000506958 C1orf141Q5JVX7 400 aa28.85■■■□□ 2.21
APBB3-213ENST00000506958 STK32BQ9NY57 414 aa28.85■■■□□ 2.21
APBB3-213ENST00000506958 HMGB2P26583 209 aaKnown RBP28.84■■■□□ 2.21
APBB3-213ENST00000506958 NUDCQ9Y266 331 aa28.84■■■□□ 2.21
APBB3-213ENST00000506958 LY75O60449 1722 aa28.83■■■□□ 2.21
APBB3-213ENST00000506958 U2SURPO15042 1029 aaKnown RBP28.83■■■□□ 2.21
APBB3-213ENST00000506958 HMOX1P09601 288 aa28.83■■■□□ 2.21
APBB3-213ENST00000506958 MPRIPQ6WCQ1 1025 aa28.83■■■□□ 2.21
APBB3-213ENST00000506958 DCAF5Q96JK2 942 aa28.83■■■□□ 2.21
APBB3-213ENST00000506958 SMARCC1Q92922 1105 aaPredicted RBP28.82■■■□□ 2.2
APBB3-213ENST00000506958 ANO8Q9HCE9 1232 aaPredicted RBP28.81■■■□□ 2.2
APBB3-213ENST00000506958 TMOD3Q9NYL9 352 aa28.81■■■□□ 2.2
APBB3-213ENST00000506958 LRP5O75197 1615 aa28.8■■■□□ 2.2
APBB3-213ENST00000506958 PAPPAQ13219 1627 aa28.8■■■□□ 2.2
APBB3-213ENST00000506958 RALBP1Q15311 655 aa28.79■■■□□ 2.2
APBB3-213ENST00000506958 PALLDQ8WX93 1383 aa28.78■■■□□ 2.2
APBB3-213ENST00000506958 ERVV-2B6SEH9 535 aa28.78■■■□□ 2.2
APBB3-213ENST00000506958 PIGBQ92521 554 aa28.77■■■□□ 2.2
APBB3-213ENST00000506958 CCNL1Q9UK58 526 aaPredicted RBP28.77■■■□□ 2.2
APBB3-213ENST00000506958 SLC15A2Q16348 729 aa28.76■■■□□ 2.19
APBB3-213ENST00000506958 AKAP4Q5JQC9 854 aa28.76■■■□□ 2.19
APBB3-213ENST00000506958 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
APBB3-213ENST00000506958 KDM6AO15550 1401 aaPredicted RBP28.74■■■□□ 2.19
APBB3-213ENST00000506958 U2AF1L5P0DN76 240 aaPredicted RBP28.71■■■□□ 2.19
APBB3-213ENST00000506958 CABP4P57796 275 aa28.71■■■□□ 2.19
APBB3-213ENST00000506958 U2AF1Q01081 240 aaKnown RBP eCLIP28.71■■■□□ 2.19
APBB3-213ENST00000506958 SCN11AQ9UI33 1791 aa28.7■■■□□ 2.19
APBB3-213ENST00000506958 GAS2L2Q8NHY3 880 aa28.7■■■□□ 2.18
APBB3-213ENST00000506958 CASZ1Q86V15 1759 aa28.69■■■□□ 2.18
APBB3-213ENST00000506958 MTHFSDQ2M296 383 aaKnown RBP28.68■■■□□ 2.18
APBB3-213ENST00000506958 C5P01031 1676 aa28.67■■■□□ 2.18
APBB3-213ENST00000506958 QSER1Q2KHR3 1735 aa28.67■■■□□ 2.18
APBB3-213ENST00000506958 AKT1S1Q96B36 256 aa28.67■■■□□ 2.18
APBB3-213ENST00000506958 FCHSD2O94868 740 aa28.66■■■□□ 2.18
APBB3-213ENST00000506958 PRKAR2BP31323 418 aa28.66■■■□□ 2.18
APBB3-213ENST00000506958 ZNF827Q17R98 1081 aa28.66■■■□□ 2.18
APBB3-213ENST00000506958 RSPH6AQ9H0K4 717 aa28.66■■■□□ 2.18
APBB3-213ENST00000506958 MYBBP1AQ9BQG0 1328 aaKnown RBP28.66■■■□□ 2.18
APBB3-213ENST00000506958 KCNQ4P56696 695 aa28.65■■■□□ 2.18
APBB3-213ENST00000506958 SPON1Q9HCB6 807 aa28.65■■■□□ 2.18
APBB3-213ENST00000506958 ASAP1Q9ULH1 1129 aa28.65■■■□□ 2.18
APBB3-213ENST00000506958 TAF1LQ8IZX4 1826 aa28.64■■■□□ 2.18
APBB3-213ENST00000506958 LOC102724428A0A0B4J2F2 783 aa28.64■■■□□ 2.18
APBB3-213ENST00000506958 SIK1P57059 783 aa28.64■■■□□ 2.18
APBB3-213ENST00000506958 TFCP2L1Q9NZI6 479 aa28.64■■■□□ 2.18
APBB3-213ENST00000506958 MAP3K5Q99683 1374 aa28.63■■■□□ 2.17
APBB3-213ENST00000506958 ATG3Q9NT62 314 aa28.63■■■□□ 2.17
APBB3-213ENST00000506958 VIRMAQ69YN4 1812 aaKnown RBP28.63■■■□□ 2.17
APBB3-213ENST00000506958 MRC1P22897 1456 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms