RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 DDX10Q13206 875 aaKnown RBP26.9■■□□□ 1.9
SNX25-204ENST00000506896 KCNQ2O43526 872 aa26.89■■□□□ 1.9
SNX25-204ENST00000506896 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
SNX25-204ENST00000506896 NUP188Q5SRE5 1749 aa26.89■■□□□ 1.9
SNX25-204ENST00000506896 MTHFSP49914 203 aa26.88■■□□□ 1.89
SNX25-204ENST00000506896 EIF4A2Q14240 407 aaKnown RBP26.88■■□□□ 1.89
SNX25-204ENST00000506896 USHBP1Q8N6Y0 703 aa26.88■■□□□ 1.89
SNX25-204ENST00000506896 MEGF6O75095 1541 aa26.88■■□□□ 1.89
SNX25-204ENST00000506896 NHSQ6T4R5 1651 aa26.87■■□□□ 1.89
SNX25-204ENST00000506896 PSDA5PKW4 1024 aaPredicted RBP26.87■■□□□ 1.89
SNX25-204ENST00000506896 SHANK3Q9BYB0 1731 aa26.87■■□□□ 1.89
SNX25-204ENST00000506896 NCAPD2Q15021 1401 aa26.86■■□□□ 1.89
SNX25-204ENST00000506896 ZCRB1Q8TBF4 217 aaKnown RBP26.86■■□□□ 1.89
SNX25-204ENST00000506896 DDX54Q8TDD1 881 aaKnown RBP26.86■■□□□ 1.89
SNX25-204ENST00000506896 PROM2Q8N271 834 aa26.85■■□□□ 1.89
SNX25-204ENST00000506896 RAPGEF4Q8WZA2 1011 aa26.85■■□□□ 1.89
SNX25-204ENST00000506896 ACSBG1Q96GR2 724 aa26.85■■□□□ 1.89
SNX25-204ENST00000506896 EYA1Q99502 592 aa26.85■■□□□ 1.89
SNX25-204ENST00000506896 ZNF316A6NFI3 1004 aaPredicted RBP26.84■■□□□ 1.89
SNX25-204ENST00000506896 R3HDM1Q15032 1099 aaKnown RBP26.84■■□□□ 1.89
SNX25-204ENST00000506896 TATP17735 454 aaPredicted RBP26.81■■□□□ 1.88
SNX25-204ENST00000506896 NBPF14Q5TI25 921 aa26.8■■□□□ 1.88
SNX25-204ENST00000506896 IGSF1Q8N6C5 1336 aa26.8■■□□□ 1.88
SNX25-204ENST00000506896 BTAF1O14981 1849 aa26.79■■□□□ 1.88
SNX25-204ENST00000506896 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
SNX25-204ENST00000506896 IL13P35225 146 aa26.78■■□□□ 1.88
SNX25-204ENST00000506896 PLEKHG2Q9H7P9 1386 aa26.78■■□□□ 1.88
SNX25-204ENST00000506896 DIAPH1O60610 1272 aaKnown RBP26.76■■□□□ 1.87
SNX25-204ENST00000506896 TXNRD1Q16881 649 aa26.76■■□□□ 1.87
SNX25-204ENST00000506896 CFAP53Q96M91 514 aa26.76■■□□□ 1.87
SNX25-204ENST00000506896 RALBP1Q15311 655 aa26.75■■□□□ 1.87
SNX25-204ENST00000506896 PRIM1P49642 420 aaKnown RBP26.73■■□□□ 1.87
SNX25-204ENST00000506896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.73■■□□□ 1.876e-7■■■□□ 18.3
SNX25-204ENST00000506896 PKD1L3Q7Z443 1732 aa26.73■■□□□ 1.87
SNX25-204ENST00000506896 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
SNX25-204ENST00000506896 LRP5O75197 1615 aa26.72■■□□□ 1.87
SNX25-204ENST00000506896 PCDH11XQ9BZA7 1347 aa26.72■■□□□ 1.87
SNX25-204ENST00000506896 PCDH11YQ9BZA8 1340 aa26.72■■□□□ 1.87
SNX25-204ENST00000506896 COL3A1P02461 1466 aaPredicted RBP26.72■■□□□ 1.87
SNX25-204ENST00000506896 CYP27B1O15528 508 aa26.71■■□□□ 1.87
SNX25-204ENST00000506896 ANO8Q9HCE9 1232 aaPredicted RBP26.71■■□□□ 1.87
SNX25-204ENST00000506896 SPG7Q9UQ90 795 aa26.71■■□□□ 1.87
SNX25-204ENST00000506896 KDRP35968 1356 aa26.71■■□□□ 1.87
SNX25-204ENST00000506896 SULT6B1Q6IMI4 303 aa26.69■■□□□ 1.86
SNX25-204ENST00000506896 SYTL4Q96C24 671 aaPredicted RBP26.66■■□□□ 1.86
SNX25-204ENST00000506896 NKX1-1Q15270 411 aaPredicted RBP26.65■■□□□ 1.86
SNX25-204ENST00000506896 AMOTQ4VCS5 1084 aa26.65■■□□□ 1.86
SNX25-204ENST00000506896 AEBP1Q8IUX7 1158 aa26.65■■□□□ 1.86
SNX25-204ENST00000506896 LRRC4BQ9NT99 713 aa26.65■■□□□ 1.86
SNX25-204ENST00000506896 NUDCQ9Y266 331 aa26.65■■□□□ 1.86
SNX25-204ENST00000506896 U2SURPO15042 1029 aaKnown RBP26.63■■□□□ 1.85
SNX25-204ENST00000506896 SLC15A2Q16348 729 aa26.63■■□□□ 1.85
SNX25-204ENST00000506896 PLEKHO1Q53GL0 409 aaPredicted RBP26.63■■□□□ 1.85
SNX25-204ENST00000506896 LY75O60449 1722 aa26.62■■□□□ 1.85
SNX25-204ENST00000506896 PAPPAQ13219 1627 aa26.62■■□□□ 1.85
SNX25-204ENST00000506896 MYBBP1AQ9BQG0 1328 aaKnown RBP26.62■■□□□ 1.85
SNX25-204ENST00000506896 ITGB4P16144 1822 aa26.61■■□□□ 1.85
SNX25-204ENST00000506896 SLC27A3Q5K4L6 730 aa26.61■■□□□ 1.85
SNX25-204ENST00000506896 STK32BQ9NY57 414 aa26.61■■□□□ 1.85
SNX25-204ENST00000506896 TOGARAM1Q9Y4F4 1720 aa26.6■■□□□ 1.85
SNX25-204ENST00000506896 HMOX1P09601 288 aa26.6■■□□□ 1.85
SNX25-204ENST00000506896 IFNL2Q8IZJ0 200 aa26.6■■□□□ 1.85
SNX25-204ENST00000506896 CASZ1Q86V15 1759 aa26.6■■□□□ 1.85
SNX25-204ENST00000506896 PRKRIP1Q9H875 184 aaPredicted RBP26.59■■□□□ 1.85
SNX25-204ENST00000506896 PHKG2P15735 406 aa26.58■■□□□ 1.85
SNX25-204ENST00000506896 PDGFDQ9GZP0 370 aaPredicted RBP26.58■■□□□ 1.85
SNX25-204ENST00000506896 HSP90AB1P08238 724 aaKnown RBP26.55■■□□□ 1.84
SNX25-204ENST00000506896 MPRIPQ6WCQ1 1025 aa26.55■■□□□ 1.84
SNX25-204ENST00000506896 U2AF1L5P0DN76 240 aaPredicted RBP26.54■■□□□ 1.84
SNX25-204ENST00000506896 U2AF1Q01081 240 aaKnown RBP eCLIP26.54■■□□□ 1.84
SNX25-204ENST00000506896 ZNF530Q6P9A1 599 aaPredicted RBP26.54■■□□□ 1.84
SNX25-204ENST00000506896 AKT1S1Q96B36 256 aa26.54■■□□□ 1.84
SNX25-204ENST00000506896 KCNQ4P56696 695 aa26.53■■□□□ 1.84
SNX25-204ENST00000506896 ZNF827Q17R98 1081 aa26.53■■□□□ 1.84
SNX25-204ENST00000506896 C1orf141Q5JVX7 400 aa26.53■■□□□ 1.84
SNX25-204ENST00000506896 PIGBQ92521 554 aa26.53■■□□□ 1.84
SNX25-204ENST00000506896 SPON1Q9HCB6 807 aa26.53■■□□□ 1.84
SNX25-204ENST00000506896 FCHSD2O94868 740 aa26.51■■□□□ 1.83
SNX25-204ENST00000506896 DCAF5Q96JK2 942 aa26.5■■□□□ 1.83
SNX25-204ENST00000506896 RSPH6AQ9H0K4 717 aa26.5■■□□□ 1.83
SNX25-204ENST00000506896 CCNL1Q9UK58 526 aaPredicted RBP26.5■■□□□ 1.83
SNX25-204ENST00000506896 QSER1Q2KHR3 1735 aa26.48■■□□□ 1.83
SNX25-204ENST00000506896 AKAP4Q5JQC9 854 aa26.48■■□□□ 1.83
SNX25-204ENST00000506896 PRKAR2BP31323 418 aa26.47■■□□□ 1.83
SNX25-204ENST00000506896 SMARCC1Q92922 1105 aaPredicted RBP26.47■■□□□ 1.83
SNX25-204ENST00000506896 PALLDQ8WX93 1383 aa26.46■■□□□ 1.83
SNX25-204ENST00000506896 ZBTB7AO95365 584 aa26.46■■□□□ 1.83
SNX25-204ENST00000506896 MTHFSDQ2M296 383 aaKnown RBP26.46■■□□□ 1.83
SNX25-204ENST00000506896 GAS2L2Q8NHY3 880 aa26.46■■□□□ 1.83
SNX25-204ENST00000506896 TAF1LQ8IZX4 1826 aa26.46■■□□□ 1.83
SNX25-204ENST00000506896 TUBGCP6Q96RT7 1819 aa26.45■■□□□ 1.82
SNX25-204ENST00000506896 ERVV-2B6SEH9 535 aa26.45■■□□□ 1.82
SNX25-204ENST00000506896 ANP32CO43423 234 aa26.45■■□□□ 1.82
SNX25-204ENST00000506896 TMOD3Q9NYL9 352 aa26.45■■□□□ 1.82
SNX25-204ENST00000506896 PNNQ9H307 717 aaKnown RBP26.44■■□□□ 1.82
SNX25-204ENST00000506896 PTGER2P43116 358 aa26.43■■□□□ 1.82
SNX25-204ENST00000506896 KDM6AO15550 1401 aaPredicted RBP26.42■■□□□ 1.82
SNX25-204ENST00000506896 NEFMP07197 916 aa26.42■■□□□ 1.82
SNX25-204ENST00000506896 MTFR1LQ9H019 292 aa26.42■■□□□ 1.82
SNX25-204ENST00000506896 ASAP1Q9ULH1 1129 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms