RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
SNCB-203ENST00000506696 KCNQ4P56696 695 aa19.14■□□□□ 0.65
SNCB-203ENST00000506696 SLC15A2Q16348 729 aa19.14■□□□□ 0.65
SNCB-203ENST00000506696 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
SNCB-203ENST00000506696 KAT6BQ8WYB5 2073 aa19.13■□□□□ 0.65
SNCB-203ENST00000506696 ZNF827Q17R98 1081 aa19.13■□□□□ 0.65
SNCB-203ENST00000506696 LRRC4BQ9NT99 713 aa19.13■□□□□ 0.65
SNCB-203ENST00000506696 FLT4P35916 1363 aa19.13■□□□□ 0.65
SNCB-203ENST00000506696 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
SNCB-203ENST00000506696 NSD2O96028 1365 aa19.12■□□□□ 0.65
SNCB-203ENST00000506696 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
SNCB-203ENST00000506696 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
SNCB-203ENST00000506696 ZCRB1Q8TBF4 217 aaKnown RBP19.12■□□□□ 0.65
SNCB-203ENST00000506696 INSRP06213 1382 aa19.11■□□□□ 0.65
SNCB-203ENST00000506696 PRIM1P49642 420 aaKnown RBP19.11■□□□□ 0.65
SNCB-203ENST00000506696 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
SNCB-203ENST00000506696 PTGER2P43116 358 aa19.08■□□□□ 0.64
SNCB-203ENST00000506696 RAPGEF4Q8WZA2 1011 aa19.08■□□□□ 0.64
SNCB-203ENST00000506696 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.64
SNCB-203ENST00000506696 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
SNCB-203ENST00000506696 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
SNCB-203ENST00000506696 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
SNCB-203ENST00000506696 TUBGCP6Q96RT7 1819 aa19.04■□□□□ 0.64
SNCB-203ENST00000506696 TOGARAM1Q9Y4F4 1720 aa19.04■□□□□ 0.64
SNCB-203ENST00000506696 KIF24Q5T7B8 1368 aa19.04■□□□□ 0.64
SNCB-203ENST00000506696 LY75O60449 1722 aa19.03■□□□□ 0.64
SNCB-203ENST00000506696 CYP27B1O15528 508 aa19.02■□□□□ 0.64
SNCB-203ENST00000506696 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
SNCB-203ENST00000506696 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
SNCB-203ENST00000506696 PANK3Q9H999 370 aa19.02■□□□□ 0.64
SNCB-203ENST00000506696 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.63
SNCB-203ENST00000506696 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
SNCB-203ENST00000506696 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
SNCB-203ENST00000506696 PKD1L3Q7Z443 1732 aa19.01■□□□□ 0.63
SNCB-203ENST00000506696 POLKQ9UBT6 870 aa19.01■□□□□ 0.63
SNCB-203ENST00000506696 SGIP1Q9BQI5 828 aa19■□□□□ 0.63
SNCB-203ENST00000506696 FHDC1Q9C0D6 1143 aaPredicted RBP19■□□□□ 0.63
SNCB-203ENST00000506696 CCNL1Q9UK58 526 aaPredicted RBP19■□□□□ 0.63
SNCB-203ENST00000506696 NCAPD2Q15021 1401 aa19■□□□□ 0.63
SNCB-203ENST00000506696 WASHC2AQ641Q2 1341 aa19■□□□□ 0.63
SNCB-203ENST00000506696 PNPLA7Q6ZV29 1317 aa19■□□□□ 0.63
SNCB-203ENST00000506696 SLC27A3Q5K4L6 730 aa18.99■□□□□ 0.63
SNCB-203ENST00000506696 EYA1Q99502 592 aa18.99■□□□□ 0.63
SNCB-203ENST00000506696 MPRIPQ6WCQ1 1025 aa18.98■□□□□ 0.63
SNCB-203ENST00000506696 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
SNCB-203ENST00000506696 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
SNCB-203ENST00000506696 QSER1Q2KHR3 1735 aa18.96■□□□□ 0.63
SNCB-203ENST00000506696 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
SNCB-203ENST00000506696 ITGB4P16144 1822 aa18.95■□□□□ 0.62
SNCB-203ENST00000506696 C5P01031 1676 aa18.95■□□□□ 0.62
SNCB-203ENST00000506696 PALLDQ8WX93 1383 aa18.94■□□□□ 0.62
SNCB-203ENST00000506696 ARXQ96QS3 562 aa18.94■□□□□ 0.62
SNCB-203ENST00000506696 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
SNCB-203ENST00000506696 YY1P25490 414 aa18.93■□□□□ 0.62
SNCB-203ENST00000506696 UTRNP46939 3433 aa18.93■□□□□ 0.62
SNCB-203ENST00000506696 MSH5O43196 834 aa18.92■□□□□ 0.62
SNCB-203ENST00000506696 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
SNCB-203ENST00000506696 SMIM5Q71RC9 77 aa18.91■□□□□ 0.62
SNCB-203ENST00000506696 PIGBQ92521 554 aa18.91■□□□□ 0.62
SNCB-203ENST00000506696 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
SNCB-203ENST00000506696 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
SNCB-203ENST00000506696 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
SNCB-203ENST00000506696 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
SNCB-203ENST00000506696 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
SNCB-203ENST00000506696 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
SNCB-203ENST00000506696 AMIGO3Q86WK7 504 aa18.89■□□□□ 0.61
SNCB-203ENST00000506696 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
SNCB-203ENST00000506696 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
SNCB-203ENST00000506696 PHKG2P15735 406 aa18.88■□□□□ 0.61
SNCB-203ENST00000506696 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
SNCB-203ENST00000506696 COL24A1Q17RW2 1714 aa18.88■□□□□ 0.61
SNCB-203ENST00000506696 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
SNCB-203ENST00000506696 POLD1P28340 1107 aa18.86■□□□□ 0.61
SNCB-203ENST00000506696 SLC16A10Q8TF71 515 aa18.86■□□□□ 0.61
SNCB-203ENST00000506696 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
SNCB-203ENST00000506696 ASAP1Q9ULH1 1129 aa18.86■□□□□ 0.61
SNCB-203ENST00000506696 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
SNCB-203ENST00000506696 GOLGB1Q14789 3259 aaKnown RBP18.85■□□□□ 0.61
SNCB-203ENST00000506696 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
SNCB-203ENST00000506696 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
SNCB-203ENST00000506696 PHF14O94880 888 aa18.84■□□□□ 0.61
SNCB-203ENST00000506696 CNGB1Q14028 1251 aaPredicted RBP18.84■□□□□ 0.61
SNCB-203ENST00000506696 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
SNCB-203ENST00000506696 MAP3K5Q99683 1374 aa18.83■□□□□ 0.61
SNCB-203ENST00000506696 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
SNCB-203ENST00000506696 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
SNCB-203ENST00000506696 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
SNCB-203ENST00000506696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.6
SNCB-203ENST00000506696 KDM6AO15550 1401 aaPredicted RBP18.83■□□□□ 0.6
SNCB-203ENST00000506696 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
SNCB-203ENST00000506696 SIK1P57059 783 aa18.82■□□□□ 0.6
SNCB-203ENST00000506696 ITPK1Q13572 414 aa18.82■□□□□ 0.6
SNCB-203ENST00000506696 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
SNCB-203ENST00000506696 AK7Q96M32 723 aa18.82■□□□□ 0.6
SNCB-203ENST00000506696 UBR3Q6ZT12 1888 aa18.81■□□□□ 0.6
SNCB-203ENST00000506696 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
SNCB-203ENST00000506696 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
SNCB-203ENST00000506696 GPR162Q16538 588 aa18.79■□□□□ 0.6
SNCB-203ENST00000506696 SULT6B1Q6IMI4 303 aa18.79■□□□□ 0.6
SNCB-203ENST00000506696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms