RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ZNF853P0CG23 659 aa20.87■□□□□ 0.93
SQSTM1-211ENST00000506690 REC8O95072 547 aa20.87■□□□□ 0.93
SQSTM1-211ENST00000506690 GNAI1P63096 354 aa20.87■□□□□ 0.93
SQSTM1-211ENST00000506690 NFE2L2Q16236 605 aa20.87■□□□□ 0.93
SQSTM1-211ENST00000506690 PRIMPOLQ96LW4 560 aa20.87■□□□□ 0.93
SQSTM1-211ENST00000506690 BRD1O95696 1058 aa20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 OTUD7AQ8TE49 926 aaPredicted RBP20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 PTMAP06454 111 aaKnown RBP20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 ZSCAN20P17040 1043 aaPredicted RBP20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 GTF2F1P35269 517 aaKnown RBP eCLIP20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
SQSTM1-211ENST00000506690 ATP10DQ9P241 1426 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 PRDM10Q9NQV6 1147 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 TERF2IPQ9NYB0 399 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 ABCC3O15438 1527 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 TWISTNBQ3B726 338 aaPredicted RBP20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 ANKRD44Q8N8A2 993 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
SQSTM1-211ENST00000506690 ELL2O00472 640 aaPredicted RBP20.84■□□□□ 0.93
SQSTM1-211ENST00000506690 PIBF1Q8WXW3 757 aa20.84■□□□□ 0.93
SQSTM1-211ENST00000506690 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
SQSTM1-211ENST00000506690 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
SQSTM1-211ENST00000506690 ZNF710Q8N1W2 664 aa20.84■□□□□ 0.93
SQSTM1-211ENST00000506690 HMGN5P82970 282 aaKnown RBP20.83■□□□□ 0.93
SQSTM1-211ENST00000506690 SYAP1Q96A49 352 aaPredicted RBP20.83■□□□□ 0.93
SQSTM1-211ENST00000506690 TMX3Q96JJ7 454 aa20.83■□□□□ 0.93
SQSTM1-211ENST00000506690 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.92
SQSTM1-211ENST00000506690 ERC2O15083 957 aa20.83■□□□□ 0.92
SQSTM1-211ENST00000506690 SAFB2Q14151 953 aaKnown RBP eCLIP20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 NEXMIFQ5QGS0 1516 aa20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 CUL4AQ13619 759 aa20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 FOXD4L5Q5VV16 416 aaPredicted RBP20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 FOXD4L4Q8WXT5 416 aaPredicted RBP20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
SQSTM1-211ENST00000506690 RPAP2Q8IXW5 612 aaPredicted RBP20.81■□□□□ 0.92
SQSTM1-211ENST00000506690 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
SQSTM1-211ENST00000506690 PIK3C2BO00750 1634 aa20.81■□□□□ 0.92
SQSTM1-211ENST00000506690 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 MCM2P49736 904 aa20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 UVSSAQ2YD98 709 aa20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 DNTTIP2Q5QJE6 756 aaKnown RBP20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 NOLC1Q14978 699 aaKnown RBP eCLIP20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 FAM184AQ8NB25 1140 aa20.8■□□□□ 0.92
SQSTM1-211ENST00000506690 PHF14O94880 888 aa20.79■□□□□ 0.92
SQSTM1-211ENST00000506690 JARID2Q92833 1246 aaPredicted RBP20.79■□□□□ 0.92
SQSTM1-211ENST00000506690 NEK4P51957 841 aa20.79■□□□□ 0.92
SQSTM1-211ENST00000506690 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
SQSTM1-211ENST00000506690 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
SQSTM1-211ENST00000506690 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
SQSTM1-211ENST00000506690 SPTLC3Q9NUV7 552 aa20.77■□□□□ 0.92
SQSTM1-211ENST00000506690 TSC1Q92574 1164 aa20.77■□□□□ 0.92
SQSTM1-211ENST00000506690 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
SQSTM1-211ENST00000506690 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.91
SQSTM1-211ENST00000506690 NUTM2DQ5VT03 806 aaPredicted RBP20.76■□□□□ 0.91
SQSTM1-211ENST00000506690 DLG5Q8TDM6 1919 aa20.76■□□□□ 0.91
SQSTM1-211ENST00000506690 RGS12O14924 1447 aa20.76■□□□□ 0.91
SQSTM1-211ENST00000506690 HMOX1P09601 288 aa20.76■□□□□ 0.91
SQSTM1-211ENST00000506690 PTPRMP28827 1452 aa20.76■□□□□ 0.91
SQSTM1-211ENST00000506690 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-211ENST00000506690 ZNF830Q96NB3 372 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-211ENST00000506690 GTPBP4Q9BZE4 634 aaKnown RBP20.75■□□□□ 0.91
SQSTM1-211ENST00000506690 OSBPL3Q9H4L5 887 aa20.75■□□□□ 0.91
SQSTM1-211ENST00000506690 RTL1A6NKG5 1358 aa20.74■□□□□ 0.91
SQSTM1-211ENST00000506690 GADD45BO75293 160 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-211ENST00000506690 HDGFL2Q7Z4V5 671 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-211ENST00000506690 KIF3AQ9Y496 699 aa20.74■□□□□ 0.91
SQSTM1-211ENST00000506690 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
SQSTM1-211ENST00000506690 USP25Q9UHP3 1055 aa20.73■□□□□ 0.91
SQSTM1-211ENST00000506690 MAP2P11137 1827 aaKnown RBP20.73■□□□□ 0.91
SQSTM1-211ENST00000506690 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 TTC12Q9H892 705 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 CPSF1Q10570 1443 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 ZBTB7CA1YPR0 619 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 ADCY5O95622 1261 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 IDI1Q13907 227 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 USP48Q86UV5 1035 aa20.72■□□□□ 0.91
SQSTM1-211ENST00000506690 CBX1P83916 185 aa20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 ATP2B3Q16720 1220 aa20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 MPNDQ8N594 471 aa20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 STK26Q9P289 416 aa20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
SQSTM1-211ENST00000506690 APBB1O00213 710 aa20.7■□□□□ 0.91
SQSTM1-211ENST00000506690 FBLN1P23142 703 aa20.7■□□□□ 0.91
SQSTM1-211ENST00000506690 ANAPC15P60006 121 aa20.7■□□□□ 0.91
SQSTM1-211ENST00000506690 PPP4R3BQ5MIZ7 849 aa20.7■□□□□ 0.91
SQSTM1-211ENST00000506690 TMEM87AQ8NBN3 555 aa20.7■□□□□ 0.91
SQSTM1-211ENST00000506690 MINK1Q8N4C8 1332 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-211ENST00000506690 MSH6P52701 1360 aa20.7■□□□□ 0.9
SQSTM1-211ENST00000506690 PDE1AP54750 535 aa20.7■□□□□ 0.9
SQSTM1-211ENST00000506690 IL17RAQ96F46 866 aa20.7■□□□□ 0.9
SQSTM1-211ENST00000506690 TCHHQ07283 1943 aa20.7■□□□□ 0.9
SQSTM1-211ENST00000506690 KIF20AO95235 890 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 IL13P35225 146 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 C17orf53Q8N3J3 647 aaPredicted RBP20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
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