RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PPP1R15AO75807 674 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-204ENST00000505804 TIMP2P16035 220 aa7.78□□□□□ -1.16
TOPBP1-204ENST00000505804 RASA1P20936 1047 aa7.78□□□□□ -1.16
TOPBP1-204ENST00000505804 CBLBQ13191 982 aa7.78□□□□□ -1.16
TOPBP1-204ENST00000505804 PCDHGA11Q9Y5H2 935 aa7.78□□□□□ -1.16
TOPBP1-204ENST00000505804 ATP5J2-PTCD1G3V325 749 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 GTF2IP78347 998 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 CLDN10P78369 228 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 TRIM52Q96A61 297 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 OSBPL3Q9H4L5 887 aa7.77□□□□□ -1.17
TOPBP1-204ENST00000505804 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-204ENST00000505804 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-204ENST00000505804 TRIM50Q86XT4 487 aa7.76□□□□□ -1.17
TOPBP1-204ENST00000505804 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 STAU1O95793 577 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 PTK7Q13308 1070 aa7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 PKDCCQ504Y2 493 aa7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 ZNF594Q96JF6 807 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 DNAAF2Q9NVR5 837 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 KIAA1024Q9UPX6 916 aa7.75□□□□□ -1.17
TOPBP1-204ENST00000505804 DGAT1O75907 488 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 ATG7O95352 703 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 AVPP01185 164 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 PSME1Q06323 249 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 Q6ZVU0 165 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
TOPBP1-204ENST00000505804 FAM196BA6NMK8 535 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L15C9J2P7 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L10C9JJH3 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L13C9JLJ4 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L12C9JPN9 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L11C9JVI0 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L21D6R901 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L18D6R9N7 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L22D6RA61 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L17D6RBQ6 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L19D6RCP7 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L20D6RJB6 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 ADH1AP07327 375 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 USP17L24Q0WX57 530 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 LARGE2Q8N3Y3 721 aa7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 KDF1Q8NAX2 398 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 IRX2Q9BZI1 471 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-204ENST00000505804 LAPTM4AQ15012 233 aa7.72□□□□□ -1.17
TOPBP1-204ENST00000505804 CYP2U1Q7Z449 544 aa7.72□□□□□ -1.17
TOPBP1-204ENST00000505804 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-204ENST00000505804 DKK1O94907 266 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 RELBQ01201 579 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 DPYDQ12882 1025 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 MEIOBQ8N635 442 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 TPCN2Q8NHX9 752 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 ZNF395Q9H8N7 513 aaPredicted RBP7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 ZMIZ1Q9ULJ6 1067 aa7.71□□□□□ -1.18
TOPBP1-204ENST00000505804 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 GNRH1P01148 92 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 PTGIRP43119 386 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 SCNN1DP51172 638 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 GDF10P55107 478 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 SIX5Q8N196 739 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 FAM200AQ8TCP9 573 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 ARXQ96QS3 562 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
TOPBP1-204ENST00000505804 A0A1W2PRU2 124 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 AXIN1O15169 862 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 CTC1Q2NKJ3 1217 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 STK32AQ8WU08 396 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 ARHGEF10LQ9HCE6 1279 aa7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-204ENST00000505804 INHAP05111 366 aa7.68□□□□□ -1.18
TOPBP1-204ENST00000505804 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
TOPBP1-204ENST00000505804 SEC13P55735 322 aa7.68□□□□□ -1.18
TOPBP1-204ENST00000505804 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-204ENST00000505804 SERTAD1Q9UHV2 236 aa7.68□□□□□ -1.18
TOPBP1-204ENST00000505804 MEN1O00255 615 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 ST8SIA5O15466 376 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 IL2RAP01589 272 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 HOMEZQ8IX15 550 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 XAGE2Q96GT9 111 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 AAASQ9NRG9 546 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 ZNF358Q9NW07 568 aa7.67□□□□□ -1.18
TOPBP1-204ENST00000505804 LGR5O75473 907 aa7.66□□□□□ -1.18
TOPBP1-204ENST00000505804 UPP2O95045 317 aa7.66□□□□□ -1.18
TOPBP1-204ENST00000505804 BMP1P13497 986 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms