RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 TATP17735 454 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-214ENST00000505746 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
PDLIM7-214ENST00000505746 MTFR1LQ9H019 292 aa16.7■□□□□ 0.26
PDLIM7-214ENST00000505746 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
PDLIM7-214ENST00000505746 PTGER2P43116 358 aa16.69■□□□□ 0.26
PDLIM7-214ENST00000505746 MEGF6O75095 1541 aa16.69■□□□□ 0.26
PDLIM7-214ENST00000505746 CASZ1Q86V15 1759 aa16.67■□□□□ 0.26
PDLIM7-214ENST00000505746 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDLIM7-214ENST00000505746 CCER1Q8TC90 406 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-214ENST00000505746 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
PDLIM7-214ENST00000505746 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
PDLIM7-214ENST00000505746 PPM1GO15355 546 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-214ENST00000505746 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
PDLIM7-214ENST00000505746 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
PDLIM7-214ENST00000505746 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
PDLIM7-214ENST00000505746 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
PDLIM7-214ENST00000505746 BTAF1O14981 1849 aa16.64■□□□□ 0.25
PDLIM7-214ENST00000505746 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
PDLIM7-214ENST00000505746 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
PDLIM7-214ENST00000505746 NSD2O96028 1365 aa16.64■□□□□ 0.25
PDLIM7-214ENST00000505746 HMGB2P26583 209 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-214ENST00000505746 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
PDLIM7-214ENST00000505746 TFCP2L1Q9NZI6 479 aa16.63■□□□□ 0.25
PDLIM7-214ENST00000505746 PAPPAQ13219 1627 aa16.63■□□□□ 0.25
PDLIM7-214ENST00000505746 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 YY1P25490 414 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 KCNQ4P56696 695 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 ARXQ96QS3 562 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 SYT17Q9BSW7 474 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 FHDC1Q9C0D6 1143 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 MYOM1P52179 1685 aa16.62■□□□□ 0.25
PDLIM7-214ENST00000505746 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
PDLIM7-214ENST00000505746 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
PDLIM7-214ENST00000505746 CYP27B1O15528 508 aa16.59■□□□□ 0.25
PDLIM7-214ENST00000505746 POLD1P28340 1107 aa16.59■□□□□ 0.25
PDLIM7-214ENST00000505746 PANK3Q9H999 370 aa16.59■□□□□ 0.25
PDLIM7-214ENST00000505746 PNPLA7Q6ZV29 1317 aa16.59■□□□□ 0.25
PDLIM7-214ENST00000505746 RGPD2P0DJD1 1756 aa16.59■□□□□ 0.25
PDLIM7-214ENST00000505746 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-214ENST00000505746 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
PDLIM7-214ENST00000505746 EYA1Q99502 592 aa16.58■□□□□ 0.24
PDLIM7-214ENST00000505746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM7-214ENST00000505746 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
PDLIM7-214ENST00000505746 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
PDLIM7-214ENST00000505746 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-214ENST00000505746 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
PDLIM7-214ENST00000505746 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-214ENST00000505746 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
PDLIM7-214ENST00000505746 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
PDLIM7-214ENST00000505746 MSH5O43196 834 aa16.55■□□□□ 0.24
PDLIM7-214ENST00000505746 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
PDLIM7-214ENST00000505746 EIF4A2Q14240 407 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-214ENST00000505746 IFNL2Q8IZJ0 200 aa16.54■□□□□ 0.24
PDLIM7-214ENST00000505746 FLAD1Q8NFF5 587 aa16.53■□□□□ 0.24
PDLIM7-214ENST00000505746 MORC1Q86VD1 984 aa16.52■□□□□ 0.24
PDLIM7-214ENST00000505746 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-214ENST00000505746 PIGBQ92521 554 aa16.52■□□□□ 0.24
PDLIM7-214ENST00000505746 LY75O60449 1722 aa16.52■□□□□ 0.24
PDLIM7-214ENST00000505746 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
PDLIM7-214ENST00000505746 PHKG2P15735 406 aa16.51■□□□□ 0.23
PDLIM7-214ENST00000505746 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
PDLIM7-214ENST00000505746 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
PDLIM7-214ENST00000505746 KNSTRNQ9Y448 316 aa16.51■□□□□ 0.23
PDLIM7-214ENST00000505746 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
PDLIM7-214ENST00000505746 GPR162Q16538 588 aa16.49■□□□□ 0.23
PDLIM7-214ENST00000505746 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
PDLIM7-214ENST00000505746 AK7Q96M32 723 aa16.49■□□□□ 0.23
PDLIM7-214ENST00000505746 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
PDLIM7-214ENST00000505746 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PDLIM7-214ENST00000505746 LOC102724428A0A0B4J2F2 783 aa16.47■□□□□ 0.23
PDLIM7-214ENST00000505746 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-214ENST00000505746 SIK1P57059 783 aa16.47■□□□□ 0.23
PDLIM7-214ENST00000505746 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
PDLIM7-214ENST00000505746 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-214ENST00000505746 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-214ENST00000505746 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
PDLIM7-214ENST00000505746 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
PDLIM7-214ENST00000505746 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
PDLIM7-214ENST00000505746 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
PDLIM7-214ENST00000505746 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
PDLIM7-214ENST00000505746 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
PDLIM7-214ENST00000505746 SSFA2P28290 1259 aa16.43■□□□□ 0.22
PDLIM7-214ENST00000505746 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-214ENST00000505746 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
PDLIM7-214ENST00000505746 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
PDLIM7-214ENST00000505746 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
PDLIM7-214ENST00000505746 TOGARAM1Q9Y4F4 1720 aa16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 PHF14O94880 888 aa16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 C5P01031 1676 aa16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
PDLIM7-214ENST00000505746 ITPK1Q13572 414 aa16.41■□□□□ 0.22
PDLIM7-214ENST00000505746 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
PDLIM7-214ENST00000505746 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
PDLIM7-214ENST00000505746 ZNF784Q8NCA9 323 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-214ENST00000505746 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms