RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
TRAPPC11-204ENST00000505676 MYT1Q01538 1121 aa21.9■■□□□ 1.1
TRAPPC11-204ENST00000505676 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
TRAPPC11-204ENST00000505676 USP19O94966 1318 aa21.9■■□□□ 1.1
TRAPPC11-204ENST00000505676 DCTN1Q14203 1278 aa21.9■■□□□ 1.1
TRAPPC11-204ENST00000505676 PTPRCP08575 1304 aa21.89■■□□□ 1.09
TRAPPC11-204ENST00000505676 GNAT3A8MTJ3 354 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 MSH5O43196 834 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 MAP3K5Q99683 1374 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 RGS3P49796 1198 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 MCM10Q7L590 875 aa21.88■■□□□ 1.09
TRAPPC11-204ENST00000505676 DDRGK1Q96HY6 314 aa21.87■■□□□ 1.09
TRAPPC11-204ENST00000505676 C8orf34Q49A92 452 aa21.86■■□□□ 1.09
TRAPPC11-204ENST00000505676 NCAPD2Q15021 1401 aa21.86■■□□□ 1.09
TRAPPC11-204ENST00000505676 ATF3P18847 181 aa21.86■■□□□ 1.09
TRAPPC11-204ENST00000505676 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
TRAPPC11-204ENST00000505676 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
TRAPPC11-204ENST00000505676 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
TRAPPC11-204ENST00000505676 NOP58Q9Y2X3 529 aaKnown RBP21.85■■□□□ 1.09
TRAPPC11-204ENST00000505676 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
TRAPPC11-204ENST00000505676 CHMP4AQ9BY43 222 aa21.84■■□□□ 1.09
TRAPPC11-204ENST00000505676 KRT28Q7Z3Y7 464 aa21.84■■□□□ 1.09
TRAPPC11-204ENST00000505676 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
TRAPPC11-204ENST00000505676 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
TRAPPC11-204ENST00000505676 ZBTB7BO15156 539 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC11-204ENST00000505676 CADPS2Q86UW7 1296 aa21.83■■□□□ 1.09
TRAPPC11-204ENST00000505676 ARHGEF25Q86VW2 580 aa21.83■■□□□ 1.09
TRAPPC11-204ENST00000505676 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
TRAPPC11-204ENST00000505676 FOXO3O43524 673 aa21.83■■□□□ 1.08
TRAPPC11-204ENST00000505676 GCP02774 474 aa21.83■■□□□ 1.08
TRAPPC11-204ENST00000505676 LMTK3Q96Q04 1460 aa21.82■■□□□ 1.08
TRAPPC11-204ENST00000505676 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
TRAPPC11-204ENST00000505676 ABCC6O95255 1503 aa21.82■■□□□ 1.08
TRAPPC11-204ENST00000505676 ELL2O00472 640 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC11-204ENST00000505676 ALS2Q96Q42 1657 aa21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 CAMTA1Q9Y6Y1 1673 aa21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 INTS3Q68E01 1043 aaKnown RBP21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 SKAP1Q86WV1 359 aa21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 ZBTB47Q9UFB7 747 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 MSH6P52701 1360 aa21.81■■□□□ 1.08
TRAPPC11-204ENST00000505676 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
TRAPPC11-204ENST00000505676 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
TRAPPC11-204ENST00000505676 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
TRAPPC11-204ENST00000505676 TAF7Q15545 349 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC11-204ENST00000505676 LTV1Q96GA3 475 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC11-204ENST00000505676 NPHP3Q7Z494 1330 aa21.78■■□□□ 1.08
TRAPPC11-204ENST00000505676 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
TRAPPC11-204ENST00000505676 PLEKHO1Q53GL0 409 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC11-204ENST00000505676 MED1Q15648 1581 aaPredicted RBP21.77■■□□□ 1.07
TRAPPC11-204ENST00000505676 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
TRAPPC11-204ENST00000505676 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
TRAPPC11-204ENST00000505676 RGS12O14924 1447 aa21.75■■□□□ 1.07
TRAPPC11-204ENST00000505676 CCDC30Q5VVM6 783 aa21.75■■□□□ 1.07
TRAPPC11-204ENST00000505676 NBPF6Q5VWK0 638 aa21.75■■□□□ 1.07
TRAPPC11-204ENST00000505676 NBPF4Q96M43 638 aa21.75■■□□□ 1.07
TRAPPC11-204ENST00000505676 STK31Q9BXU1 1019 aa21.75■■□□□ 1.07
TRAPPC11-204ENST00000505676 HOXB7P09629 217 aa21.74■■□□□ 1.07
TRAPPC11-204ENST00000505676 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
TRAPPC11-204ENST00000505676 NPM2Q86SE8 214 aaKnown RBP21.74■■□□□ 1.07
TRAPPC11-204ENST00000505676 NUCB1Q02818 461 aa21.74■■□□□ 1.07
TRAPPC11-204ENST00000505676 CACNA1FO60840 1977 aa21.73■■□□□ 1.07
TRAPPC11-204ENST00000505676 IL17REQ8NFR9 667 aa21.73■■□□□ 1.07
TRAPPC11-204ENST00000505676 CCT4P50991 539 aaKnown RBP21.72■■□□□ 1.07
TRAPPC11-204ENST00000505676 TNS3Q68CZ2 1445 aa21.71■■□□□ 1.07
TRAPPC11-204ENST00000505676 SLC4A2P04920 1241 aa21.71■■□□□ 1.07
TRAPPC11-204ENST00000505676 ANKRD24Q8TF21 1146 aa21.71■■□□□ 1.07
TRAPPC11-204ENST00000505676 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
TRAPPC11-204ENST00000505676 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC11-204ENST00000505676 FAM208AQ9UK61 1670 aaKnown RBP21.7■■□□□ 1.06
TRAPPC11-204ENST00000505676 KRT24Q2M2I5 525 aa21.7■■□□□ 1.06
TRAPPC11-204ENST00000505676 LMOD2Q6P5Q4 547 aa21.69■■□□□ 1.06
TRAPPC11-204ENST00000505676 PXDNLA1KZ92 1463 aa21.69■■□□□ 1.06
TRAPPC11-204ENST00000505676 XPCQ01831 940 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC11-204ENST00000505676 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
TRAPPC11-204ENST00000505676 USHBP1Q8N6Y0 703 aa21.68■■□□□ 1.06
TRAPPC11-204ENST00000505676 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
TRAPPC11-204ENST00000505676 PXDNQ92626 1479 aa21.67■■□□□ 1.06
TRAPPC11-204ENST00000505676 ERBB3P21860 1342 aa21.66■■□□□ 1.06
TRAPPC11-204ENST00000505676 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
TRAPPC11-204ENST00000505676 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC11-204ENST00000505676 MIS18AQ9NYP9 233 aa21.66■■□□□ 1.06
TRAPPC11-204ENST00000505676 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
TRAPPC11-204ENST00000505676 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
TRAPPC11-204ENST00000505676 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
TRAPPC11-204ENST00000505676 CPDO75976 1380 aa21.65■■□□□ 1.06
TRAPPC11-204ENST00000505676 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.06
TRAPPC11-204ENST00000505676 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC11-204ENST00000505676 TEFQ10587 303 aa21.64■■□□□ 1.05
TRAPPC11-204ENST00000505676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.64■■□□□ 1.054e-6■■■□□ 17.1
TRAPPC11-204ENST00000505676 SPATA31A3Q5VYP0 1347 aa21.63■■□□□ 1.05
TRAPPC11-204ENST00000505676 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
TRAPPC11-204ENST00000505676 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
TRAPPC11-204ENST00000505676 HMMRO75330 724 aa21.62■■□□□ 1.05
TRAPPC11-204ENST00000505676 DAXXQ9UER7 740 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC11-204ENST00000505676 STRCQ7RTU9 1775 aa21.62■■□□□ 1.05
TRAPPC11-204ENST00000505676 ATP10DQ9P241 1426 aa21.62■■□□□ 1.05
TRAPPC11-204ENST00000505676 FLIIQ13045 1269 aa21.61■■□□□ 1.05
TRAPPC11-204ENST00000505676 DCTPP1Q9H773 170 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms