RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
ITGA3-206ENST00000505612 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
ITGA3-206ENST00000505612 EYA1Q99502 592 aa17.79■□□□□ 0.44
ITGA3-206ENST00000505612 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
ITGA3-206ENST00000505612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGA3-206ENST00000505612 APBA3O96018 575 aa17.78■□□□□ 0.44
ITGA3-206ENST00000505612 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
ITGA3-206ENST00000505612 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
ITGA3-206ENST00000505612 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
ITGA3-206ENST00000505612 TNS2Q63HR2 1409 aa17.78■□□□□ 0.44
ITGA3-206ENST00000505612 PLEKHG2Q9H7P9 1386 aa17.77■□□□□ 0.43
ITGA3-206ENST00000505612 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.43
ITGA3-206ENST00000505612 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
ITGA3-206ENST00000505612 USHBP1Q8N6Y0 703 aa17.76■□□□□ 0.43
ITGA3-206ENST00000505612 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
ITGA3-206ENST00000505612 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
ITGA3-206ENST00000505612 BRWD3Q6RI45 1802 aa17.75■□□□□ 0.43
ITGA3-206ENST00000505612 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
ITGA3-206ENST00000505612 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
ITGA3-206ENST00000505612 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
ITGA3-206ENST00000505612 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
ITGA3-206ENST00000505612 PLSCR1O15162 318 aa17.73■□□□□ 0.43
ITGA3-206ENST00000505612 HMGB2P26583 209 aaKnown RBP17.73■□□□□ 0.43
ITGA3-206ENST00000505612 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
ITGA3-206ENST00000505612 IL13P35225 146 aa17.72■□□□□ 0.43
ITGA3-206ENST00000505612 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
ITGA3-206ENST00000505612 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
ITGA3-206ENST00000505612 EN1Q05925 392 aaPredicted RBP17.71■□□□□ 0.43
ITGA3-206ENST00000505612 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
ITGA3-206ENST00000505612 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
ITGA3-206ENST00000505612 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
ITGA3-206ENST00000505612 CAMKK2Q96RR4 588 aa17.7■□□□□ 0.42
ITGA3-206ENST00000505612 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
ITGA3-206ENST00000505612 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
ITGA3-206ENST00000505612 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
ITGA3-206ENST00000505612 IFNL2Q8IZJ0 200 aa17.69■□□□□ 0.42
ITGA3-206ENST00000505612 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
ITGA3-206ENST00000505612 MEGF6O75095 1541 aa17.68■□□□□ 0.42
ITGA3-206ENST00000505612 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
ITGA3-206ENST00000505612 NBPF14Q5TI25 921 aa17.68■□□□□ 0.42
ITGA3-206ENST00000505612 NKX1-1Q15270 411 aaPredicted RBP17.67■□□□□ 0.42
ITGA3-206ENST00000505612 NEFLP07196 543 aa17.66■□□□□ 0.42
ITGA3-206ENST00000505612 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
ITGA3-206ENST00000505612 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
ITGA3-206ENST00000505612 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
ITGA3-206ENST00000505612 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
ITGA3-206ENST00000505612 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
ITGA3-206ENST00000505612 CYP27B1O15528 508 aa17.65■□□□□ 0.42
ITGA3-206ENST00000505612 KCNQ2O43526 872 aa17.65■□□□□ 0.42
ITGA3-206ENST00000505612 SYTL4Q96C24 671 aaPredicted RBP17.65■□□□□ 0.42
ITGA3-206ENST00000505612 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
ITGA3-206ENST00000505612 KDRP35968 1356 aa17.65■□□□□ 0.42
ITGA3-206ENST00000505612 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
ITGA3-206ENST00000505612 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
ITGA3-206ENST00000505612 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
ITGA3-206ENST00000505612 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
ITGA3-206ENST00000505612 PHKG2P15735 406 aa17.62■□□□□ 0.41
ITGA3-206ENST00000505612 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
ITGA3-206ENST00000505612 WNK3Q9BYP7 1800 aa17.62■□□□□ 0.41
ITGA3-206ENST00000505612 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
ITGA3-206ENST00000505612 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
ITGA3-206ENST00000505612 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
ITGA3-206ENST00000505612 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
ITGA3-206ENST00000505612 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
ITGA3-206ENST00000505612 CCDC27Q2M243 656 aa17.6■□□□□ 0.41
ITGA3-206ENST00000505612 SLC27A3Q5K4L6 730 aa17.6■□□□□ 0.41
ITGA3-206ENST00000505612 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
ITGA3-206ENST00000505612 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
ITGA3-206ENST00000505612 APAF1O14727 1248 aa17.59■□□□□ 0.41
ITGA3-206ENST00000505612 FCHSD2O94868 740 aa17.59■□□□□ 0.41
ITGA3-206ENST00000505612 HMOX1P09601 288 aa17.59■□□□□ 0.41
ITGA3-206ENST00000505612 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
ITGA3-206ENST00000505612 NEFMP07197 916 aa17.58■□□□□ 0.4
ITGA3-206ENST00000505612 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
ITGA3-206ENST00000505612 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
ITGA3-206ENST00000505612 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
ITGA3-206ENST00000505612 MPRIPQ6WCQ1 1025 aa17.58■□□□□ 0.4
ITGA3-206ENST00000505612 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
ITGA3-206ENST00000505612 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
ITGA3-206ENST00000505612 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
ITGA3-206ENST00000505612 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
ITGA3-206ENST00000505612 PROM2Q8N271 834 aa17.56■□□□□ 0.4
ITGA3-206ENST00000505612 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
ITGA3-206ENST00000505612 CABP4P57796 275 aa17.55■□□□□ 0.4
ITGA3-206ENST00000505612 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
ITGA3-206ENST00000505612 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
ITGA3-206ENST00000505612 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
ITGA3-206ENST00000505612 FKBP8Q14318 412 aa17.54■□□□□ 0.4
ITGA3-206ENST00000505612 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
ITGA3-206ENST00000505612 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
ITGA3-206ENST00000505612 E9PSI1 815 aa17.53■□□□□ 0.4
ITGA3-206ENST00000505612 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
ITGA3-206ENST00000505612 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
ITGA3-206ENST00000505612 PIGBQ92521 554 aa17.53■□□□□ 0.4
ITGA3-206ENST00000505612 MTHFSDQ2M296 383 aaKnown RBP17.52■□□□□ 0.4
ITGA3-206ENST00000505612 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
ITGA3-206ENST00000505612 NHSQ6T4R5 1651 aa17.52■□□□□ 0.39
ITGA3-206ENST00000505612 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
ITGA3-206ENST00000505612 DUSP27Q5VZP5 1158 aa17.51■□□□□ 0.39
ITGA3-206ENST00000505612 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms