RNA–Protein interactions for RNA: ENST00000505368.1

RAB5CP2-201, Transcript of RAB5C, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB5CP2, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP2-201ENST00000505368 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
RAB5CP2-201ENST00000505368 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
RAB5CP2-201ENST00000505368 CYP27B1O15528 508 aa12.93□□□□□ -0.34
RAB5CP2-201ENST00000505368 PTGER2P43116 358 aa12.93□□□□□ -0.34
RAB5CP2-201ENST00000505368 EYA1Q99502 592 aa12.93□□□□□ -0.34
RAB5CP2-201ENST00000505368 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
RAB5CP2-201ENST00000505368 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
RAB5CP2-201ENST00000505368 CGNL1Q0VF96 1302 aa12.92□□□□□ -0.34
RAB5CP2-201ENST00000505368 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
RAB5CP2-201ENST00000505368 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
RAB5CP2-201ENST00000505368 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 STK32BQ9NY57 414 aa12.91□□□□□ -0.34
RAB5CP2-201ENST00000505368 KIF7Q2M1P5 1343 aa12.9□□□□□ -0.34
RAB5CP2-201ENST00000505368 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
RAB5CP2-201ENST00000505368 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
RAB5CP2-201ENST00000505368 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
RAB5CP2-201ENST00000505368 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
RAB5CP2-201ENST00000505368 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
RAB5CP2-201ENST00000505368 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
RAB5CP2-201ENST00000505368 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
RAB5CP2-201ENST00000505368 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 UTRNP46939 3433 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
RAB5CP2-201ENST00000505368 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
RAB5CP2-201ENST00000505368 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
RAB5CP2-201ENST00000505368 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
RAB5CP2-201ENST00000505368 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
RAB5CP2-201ENST00000505368 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
RAB5CP2-201ENST00000505368 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
RAB5CP2-201ENST00000505368 PIGBQ92521 554 aa12.85□□□□□ -0.35
RAB5CP2-201ENST00000505368 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
RAB5CP2-201ENST00000505368 BTAF1O14981 1849 aa12.84□□□□□ -0.35
RAB5CP2-201ENST00000505368 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
RAB5CP2-201ENST00000505368 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
RAB5CP2-201ENST00000505368 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
RAB5CP2-201ENST00000505368 PALLDQ8WX93 1383 aa12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 DOT1LQ8TEK3 1739 aa12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 PHKG2P15735 406 aa12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 MTFR1LQ9H019 292 aa12.83□□□□□ -0.36
RAB5CP2-201ENST00000505368 ANKRD26Q9UPS8 1709 aa12.82□□□□□ -0.36
RAB5CP2-201ENST00000505368 IL13P35225 146 aa12.81□□□□□ -0.36
RAB5CP2-201ENST00000505368 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
RAB5CP2-201ENST00000505368 TOGARAM1Q9Y4F4 1720 aa12.81□□□□□ -0.36
RAB5CP2-201ENST00000505368 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
RAB5CP2-201ENST00000505368 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
RAB5CP2-201ENST00000505368 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
RAB5CP2-201ENST00000505368 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
RAB5CP2-201ENST00000505368 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
RAB5CP2-201ENST00000505368 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 ITPK1Q13572 414 aa12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
RAB5CP2-201ENST00000505368 ARXQ96QS3 562 aa12.78□□□□□ -0.36
RAB5CP2-201ENST00000505368 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
RAB5CP2-201ENST00000505368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAB5CP2-201ENST00000505368 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
RAB5CP2-201ENST00000505368 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
RAB5CP2-201ENST00000505368 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
RAB5CP2-201ENST00000505368 NLGN2Q8NFZ4 835 aa12.77□□□□□ -0.37
RAB5CP2-201ENST00000505368 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
RAB5CP2-201ENST00000505368 MTHFSP49914 203 aa12.76□□□□□ -0.37
RAB5CP2-201ENST00000505368 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
RAB5CP2-201ENST00000505368 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
RAB5CP2-201ENST00000505368 KDRP35968 1356 aa12.75□□□□□ -0.37
RAB5CP2-201ENST00000505368 SIK1P57059 783 aa12.75□□□□□ -0.37
RAB5CP2-201ENST00000505368 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
RAB5CP2-201ENST00000505368 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
RAB5CP2-201ENST00000505368 PHF14O94880 888 aa12.74□□□□□ -0.37
RAB5CP2-201ENST00000505368 HMOX1P09601 288 aa12.74□□□□□ -0.37
RAB5CP2-201ENST00000505368 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
RAB5CP2-201ENST00000505368 LY75O60449 1722 aa12.73□□□□□ -0.37
RAB5CP2-201ENST00000505368 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
RAB5CP2-201ENST00000505368 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
RAB5CP2-201ENST00000505368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
RAB5CP2-201ENST00000505368 MSH5O43196 834 aa12.72□□□□□ -0.37
RAB5CP2-201ENST00000505368 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
RAB5CP2-201ENST00000505368 YY1P25490 414 aa12.71□□□□□ -0.37
RAB5CP2-201ENST00000505368 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
RAB5CP2-201ENST00000505368 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
RAB5CP2-201ENST00000505368 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
RAB5CP2-201ENST00000505368 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
RAB5CP2-201ENST00000505368 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
RAB5CP2-201ENST00000505368 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
RAB5CP2-201ENST00000505368 AK7Q96M32 723 aa12.7□□□□□ -0.38
RAB5CP2-201ENST00000505368 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms