RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-213ENST00000505074 ANKRD36BQ8N2N9 1353 aa22.69■■□□□ 1.22
PDLIM7-213ENST00000505074 PRIM1P49642 420 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-213ENST00000505074 NME9Q86XW9 330 aa22.68■■□□□ 1.22
PDLIM7-213ENST00000505074 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-213ENST00000505074 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-213ENST00000505074 ZNF526Q8TF50 670 aaPredicted RBP22.65■■□□□ 1.22
PDLIM7-213ENST00000505074 CD2APQ9Y5K6 639 aa22.64■■□□□ 1.21
PDLIM7-213ENST00000505074 ADCY9O60503 1353 aa22.63■■□□□ 1.21
PDLIM7-213ENST00000505074 MSL1Q68DK7 614 aa22.63■■□□□ 1.21
PDLIM7-213ENST00000505074 TMC1Q8TDI8 760 aa22.63■■□□□ 1.21
PDLIM7-213ENST00000505074 NSD2O96028 1365 aa22.63■■□□□ 1.21
PDLIM7-213ENST00000505074 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
PDLIM7-213ENST00000505074 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
PDLIM7-213ENST00000505074 IP6K1Q92551 441 aa22.61■■□□□ 1.21
PDLIM7-213ENST00000505074 USP47Q96K76 1375 aa22.61■■□□□ 1.21
PDLIM7-213ENST00000505074 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
PDLIM7-213ENST00000505074 C5P01031 1676 aa22.6■■□□□ 1.21
PDLIM7-213ENST00000505074 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
PDLIM7-213ENST00000505074 ZCRB1Q8TBF4 217 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-213ENST00000505074 RGPD2P0DJD1 1756 aa22.58■■□□□ 1.21
PDLIM7-213ENST00000505074 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.21
PDLIM7-213ENST00000505074 FLAD1Q8NFF5 587 aa22.58■■□□□ 1.21
PDLIM7-213ENST00000505074 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
PDLIM7-213ENST00000505074 TAF1LQ8IZX4 1826 aa22.57■■□□□ 1.2
PDLIM7-213ENST00000505074 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
PDLIM7-213ENST00000505074 SLC12A5Q9H2X9 1139 aa22.53■■□□□ 1.2
PDLIM7-213ENST00000505074 TERF2IPQ9NYB0 399 aa22.53■■□□□ 1.2
PDLIM7-213ENST00000505074 MEGF6O75095 1541 aa22.52■■□□□ 1.19
PDLIM7-213ENST00000505074 KIF3CO14782 793 aa22.51■■□□□ 1.19
PDLIM7-213ENST00000505074 APLP1P51693 650 aa22.51■■□□□ 1.19
PDLIM7-213ENST00000505074 IGSF1Q8N6C5 1336 aa22.51■■□□□ 1.19
PDLIM7-213ENST00000505074 HOXC9P31274 260 aa22.5■■□□□ 1.19
PDLIM7-213ENST00000505074 AMPHP49418 695 aa22.5■■□□□ 1.19
PDLIM7-213ENST00000505074 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
PDLIM7-213ENST00000505074 A0A1W2PP64 1363 aa22.49■■□□□ 1.19
PDLIM7-213ENST00000505074 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
PDLIM7-213ENST00000505074 MAP3K19Q56UN5 1328 aa22.48■■□□□ 1.19
PDLIM7-213ENST00000505074 C4BP0C0L5 1744 aa22.48■■□□□ 1.19
PDLIM7-213ENST00000505074 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
PDLIM7-213ENST00000505074 UBR3Q6ZT12 1888 aa22.46■■□□□ 1.19
PDLIM7-213ENST00000505074 COG3Q96JB2 828 aa22.46■■□□□ 1.19
PDLIM7-213ENST00000505074 AK7Q96M32 723 aa22.46■■□□□ 1.19
PDLIM7-213ENST00000505074 PALLDQ8WX93 1383 aa22.46■■□□□ 1.19
PDLIM7-213ENST00000505074 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
PDLIM7-213ENST00000505074 ITGB4P16144 1822 aa22.43■■□□□ 1.18
PDLIM7-213ENST00000505074 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
PDLIM7-213ENST00000505074 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 TOMM70O94826 608 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 NBPF6Q5VWK0 638 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 MPRIPQ6WCQ1 1025 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 DNAJC5GQ8N7S2 189 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 NBPF4Q96M43 638 aa22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
PDLIM7-213ENST00000505074 PHF14O94880 888 aa22.41■■□□□ 1.18
PDLIM7-213ENST00000505074 TATP17735 454 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-213ENST00000505074 SMARCC1Q92922 1105 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-213ENST00000505074 TESK2Q96S53 571 aa22.41■■□□□ 1.18
PDLIM7-213ENST00000505074 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 FBLN1P23142 703 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 USHBP1Q8N6Y0 703 aa22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-213ENST00000505074 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
PDLIM7-213ENST00000505074 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
PDLIM7-213ENST00000505074 SSFA2P28290 1259 aa22.37■■□□□ 1.17
PDLIM7-213ENST00000505074 TMF1P82094 1093 aa22.36■■□□□ 1.17
PDLIM7-213ENST00000505074 KIF13BQ9NQT8 1826 aa22.36■■□□□ 1.17
PDLIM7-213ENST00000505074 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
PDLIM7-213ENST00000505074 N4BP2Q86UW6 1770 aaPredicted RBP22.35■■□□□ 1.17
PDLIM7-213ENST00000505074 RRS1Q15050 365 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-213ENST00000505074 MAP2P11137 1827 aaKnown RBP22.33■■□□□ 1.16
PDLIM7-213ENST00000505074 KIAA1551Q9HCM1 1747 aa22.31■■□□□ 1.16
PDLIM7-213ENST00000505074 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
PDLIM7-213ENST00000505074 CYP27B1O15528 508 aa22.31■■□□□ 1.16
PDLIM7-213ENST00000505074 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
PDLIM7-213ENST00000505074 BCS1LQ9Y276 419 aa22.31■■□□□ 1.16
PDLIM7-213ENST00000505074 TGFB2P61812 414 aa22.3■■□□□ 1.16
PDLIM7-213ENST00000505074 PIGBQ92521 554 aa22.3■■□□□ 1.16
PDLIM7-213ENST00000505074 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
PDLIM7-213ENST00000505074 PKD1L3Q7Z443 1732 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 LOC102724428A0A0B4J2F2 783 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 MMP10P09238 476 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 SIK1P57059 783 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 COL13A1Q5TAT6 717 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 ARHGAP27Q6ZUM4 889 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 C16orf71Q8IYS4 520 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 RBM46Q8TBY0 533 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-213ENST00000505074 INSRP06213 1382 aa22.28■■□□□ 1.16
PDLIM7-213ENST00000505074 GNPATO15228 680 aa22.28■■□□□ 1.16
PDLIM7-213ENST00000505074 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
PDLIM7-213ENST00000505074 KIF20BQ96Q89 1820 aa22.28■■□□□ 1.16
PDLIM7-213ENST00000505074 CDCA8Q53HL2 280 aa22.27■■□□□ 1.16
PDLIM7-213ENST00000505074 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
PDLIM7-213ENST00000505074 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms