RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
NR1I3-220ENST00000505005 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
NR1I3-220ENST00000505005 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
NR1I3-220ENST00000505005 FBLN1P23142 703 aa13.24□□□□□ -0.29
NR1I3-220ENST00000505005 MTHFSP49914 203 aa13.24□□□□□ -0.29
NR1I3-220ENST00000505005 PLSCR1O15162 318 aa13.23□□□□□ -0.29
NR1I3-220ENST00000505005 NEFMP07197 916 aa13.23□□□□□ -0.29
NR1I3-220ENST00000505005 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
NR1I3-220ENST00000505005 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-220ENST00000505005 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
NR1I3-220ENST00000505005 APBA3O96018 575 aa13.22□□□□□ -0.29
NR1I3-220ENST00000505005 EYA1Q99502 592 aa13.22□□□□□ -0.29
NR1I3-220ENST00000505005 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
NR1I3-220ENST00000505005 TRIM37O94972 964 aa13.21□□□□□ -0.29
NR1I3-220ENST00000505005 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
NR1I3-220ENST00000505005 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
NR1I3-220ENST00000505005 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
NR1I3-220ENST00000505005 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
NR1I3-220ENST00000505005 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
NR1I3-220ENST00000505005 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
NR1I3-220ENST00000505005 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
NR1I3-220ENST00000505005 IL13P35225 146 aa13.19□□□□□ -0.3
NR1I3-220ENST00000505005 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
NR1I3-220ENST00000505005 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
NR1I3-220ENST00000505005 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
NR1I3-220ENST00000505005 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
NR1I3-220ENST00000505005 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
NR1I3-220ENST00000505005 KDRP35968 1356 aa13.17□□□□□ -0.3
NR1I3-220ENST00000505005 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
NR1I3-220ENST00000505005 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
NR1I3-220ENST00000505005 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
NR1I3-220ENST00000505005 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.3
NR1I3-220ENST00000505005 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 FCHSD2O94868 740 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 SBF2Q86WG5 1849 aa13.15□□□□□ -0.3
NR1I3-220ENST00000505005 ERVV-2B6SEH9 535 aa13.14□□□□□ -0.31
NR1I3-220ENST00000505005 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
NR1I3-220ENST00000505005 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
NR1I3-220ENST00000505005 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
NR1I3-220ENST00000505005 MEGF6O75095 1541 aa13.13□□□□□ -0.31
NR1I3-220ENST00000505005 U2SURPO15042 1029 aaKnown RBP13.13□□□□□ -0.31
NR1I3-220ENST00000505005 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
NR1I3-220ENST00000505005 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
NR1I3-220ENST00000505005 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
NR1I3-220ENST00000505005 PHKG2P15735 406 aa13.12□□□□□ -0.31
NR1I3-220ENST00000505005 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
NR1I3-220ENST00000505005 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
NR1I3-220ENST00000505005 EP400Q96L91 3159 aa13.11□□□□□ -0.31
NR1I3-220ENST00000505005 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-220ENST00000505005 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-220ENST00000505005 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
NR1I3-220ENST00000505005 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
NR1I3-220ENST00000505005 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
NR1I3-220ENST00000505005 CYP27B1O15528 508 aa13.1□□□□□ -0.31
NR1I3-220ENST00000505005 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-220ENST00000505005 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
NR1I3-220ENST00000505005 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
NR1I3-220ENST00000505005 ANP32CO43423 234 aa13.09□□□□□ -0.31
NR1I3-220ENST00000505005 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
NR1I3-220ENST00000505005 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
NR1I3-220ENST00000505005 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
NR1I3-220ENST00000505005 CABP4P57796 275 aa13.08□□□□□ -0.32
NR1I3-220ENST00000505005 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
NR1I3-220ENST00000505005 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
NR1I3-220ENST00000505005 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
NR1I3-220ENST00000505005 HMOX1P09601 288 aa13.07□□□□□ -0.32
NR1I3-220ENST00000505005 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
NR1I3-220ENST00000505005 FLAD1Q8NFF5 587 aa13.07□□□□□ -0.32
NR1I3-220ENST00000505005 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
NR1I3-220ENST00000505005 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
NR1I3-220ENST00000505005 KCNQ2O43526 872 aa13.06□□□□□ -0.32
NR1I3-220ENST00000505005 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
NR1I3-220ENST00000505005 MAPK8IP3Q9UPT6 1336 aa13.06□□□□□ -0.32
NR1I3-220ENST00000505005 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
NR1I3-220ENST00000505005 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-220ENST00000505005 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
NR1I3-220ENST00000505005 BTAF1O14981 1849 aa13.04□□□□□ -0.32
NR1I3-220ENST00000505005 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
NR1I3-220ENST00000505005 TEFQ10587 303 aa13.04□□□□□ -0.32
NR1I3-220ENST00000505005 RREB1Q92766 1687 aa13.03□□□□□ -0.32
NR1I3-220ENST00000505005 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
NR1I3-220ENST00000505005 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
NR1I3-220ENST00000505005 SLC16A10Q8TF71 515 aa13.03□□□□□ -0.32
NR1I3-220ENST00000505005 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
NR1I3-220ENST00000505005 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
NR1I3-220ENST00000505005 SLC15A2Q16348 729 aa13.02□□□□□ -0.33
NR1I3-220ENST00000505005 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
NR1I3-220ENST00000505005 PIGBQ92521 554 aa13.02□□□□□ -0.33
NR1I3-220ENST00000505005 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
NR1I3-220ENST00000505005 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
NR1I3-220ENST00000505005 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
NR1I3-220ENST00000505005 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
NR1I3-220ENST00000505005 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
NR1I3-220ENST00000505005 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
NR1I3-220ENST00000505005 ITGB4P16144 1822 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms