RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 NHSQ6T4R5 1651 aa28.85■■■□□ 2.21
TRAPPC11-203ENST00000504526 RREB1Q92766 1687 aa28.84■■■□□ 2.21
TRAPPC11-203ENST00000504526 EIF4A2Q14240 407 aaKnown RBP28.84■■■□□ 2.21
TRAPPC11-203ENST00000504526 PTF1AQ7RTS3 328 aa28.84■■■□□ 2.21
TRAPPC11-203ENST00000504526 EYA1Q99502 592 aa28.84■■■□□ 2.21
TRAPPC11-203ENST00000504526 NPC1L1Q9UHC9 1359 aa28.84■■■□□ 2.21
TRAPPC11-203ENST00000504526 ACSBG1Q96GR2 724 aa28.83■■■□□ 2.21
TRAPPC11-203ENST00000504526 KCNQ2O43526 872 aa28.82■■■□□ 2.2
TRAPPC11-203ENST00000504526 NBPF14Q5TI25 921 aa28.81■■■□□ 2.2
TRAPPC11-203ENST00000504526 PCDH11XQ9BZA7 1347 aa28.8■■■□□ 2.2
TRAPPC11-203ENST00000504526 PCDH11YQ9BZA8 1340 aa28.8■■■□□ 2.2
TRAPPC11-203ENST00000504526 SHANK3Q9BYB0 1731 aa28.79■■■□□ 2.2
TRAPPC11-203ENST00000504526 NUP188Q5SRE5 1749 aa28.78■■■□□ 2.2
TRAPPC11-203ENST00000504526 CC2D1BQ5T0F9 858 aaKnown RBP28.78■■■□□ 2.2
TRAPPC11-203ENST00000504526 PLEKHG2Q9H7P9 1386 aa28.77■■■□□ 2.2
TRAPPC11-203ENST00000504526 IGSF1Q8N6C5 1336 aa28.76■■■□□ 2.19
TRAPPC11-203ENST00000504526 PSDA5PKW4 1024 aaPredicted RBP28.76■■■□□ 2.19
TRAPPC11-203ENST00000504526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.76■■■□□ 2.198e-6■■■□□ 14.7
TRAPPC11-203ENST00000504526 SPG7Q9UQ90 795 aa28.76■■■□□ 2.19
TRAPPC11-203ENST00000504526 R3HDM1Q15032 1099 aaKnown RBP28.75■■■□□ 2.19
TRAPPC11-203ENST00000504526 TXNRD1Q16881 649 aa28.73■■■□□ 2.19
TRAPPC11-203ENST00000504526 PKD1L3Q7Z443 1732 aa28.72■■■□□ 2.19
TRAPPC11-203ENST00000504526 PRIM1P49642 420 aaKnown RBP28.72■■■□□ 2.19
TRAPPC11-203ENST00000504526 PROM2Q8N271 834 aa28.72■■■□□ 2.19
TRAPPC11-203ENST00000504526 MTHFSP49914 203 aa28.71■■■□□ 2.19
TRAPPC11-203ENST00000504526 SYTL4Q96C24 671 aaPredicted RBP28.71■■■□□ 2.19
TRAPPC11-203ENST00000504526 BTAF1O14981 1849 aa28.71■■■□□ 2.19
TRAPPC11-203ENST00000504526 DOT1LQ8TEK3 1739 aa28.7■■■□□ 2.19
TRAPPC11-203ENST00000504526 CYP27B1O15528 508 aa28.7■■■□□ 2.18
TRAPPC11-203ENST00000504526 KAT6BQ8WYB5 2073 aa28.68■■■□□ 2.18
TRAPPC11-203ENST00000504526 IL13P35225 146 aa28.67■■■□□ 2.18
TRAPPC11-203ENST00000504526 NKX1-1Q15270 411 aaPredicted RBP28.66■■■□□ 2.18
TRAPPC11-203ENST00000504526 IFNL2Q8IZJ0 200 aa28.64■■■□□ 2.18
TRAPPC11-203ENST00000504526 CNGB1Q14028 1251 aaPredicted RBP28.63■■■□□ 2.17
TRAPPC11-203ENST00000504526 AMOTQ4VCS5 1084 aa28.62■■■□□ 2.17
TRAPPC11-203ENST00000504526 PLEKHO1Q53GL0 409 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC11-203ENST00000504526 SLC27A3Q5K4L6 730 aa28.62■■■□□ 2.17
TRAPPC11-203ENST00000504526 STK32BQ9NY57 414 aa28.62■■■□□ 2.17
TRAPPC11-203ENST00000504526 KDRP35968 1356 aa28.62■■■□□ 2.17
TRAPPC11-203ENST00000504526 PHKG2P15735 406 aa28.61■■■□□ 2.17
TRAPPC11-203ENST00000504526 SULT6B1Q6IMI4 303 aa28.61■■■□□ 2.17
TRAPPC11-203ENST00000504526 ANO8Q9HCE9 1232 aaPredicted RBP28.61■■■□□ 2.17
TRAPPC11-203ENST00000504526 DIAPH1O60610 1272 aaKnown RBP28.6■■■□□ 2.17
TRAPPC11-203ENST00000504526 LRP5O75197 1615 aa28.6■■■□□ 2.17
TRAPPC11-203ENST00000504526 AEBP1Q8IUX7 1158 aa28.58■■■□□ 2.17
TRAPPC11-203ENST00000504526 HSP90AB1P08238 724 aaKnown RBP28.57■■■□□ 2.16
TRAPPC11-203ENST00000504526 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
TRAPPC11-203ENST00000504526 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
TRAPPC11-203ENST00000504526 MPRIPQ6WCQ1 1025 aa28.56■■■□□ 2.16
TRAPPC11-203ENST00000504526 HMGB2P26583 209 aaKnown RBP28.55■■■□□ 2.16
TRAPPC11-203ENST00000504526 LRRC4BQ9NT99 713 aa28.55■■■□□ 2.16
TRAPPC11-203ENST00000504526 ZNF530Q6P9A1 599 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC11-203ENST00000504526 CFAP53Q96M91 514 aa28.54■■■□□ 2.16
TRAPPC11-203ENST00000504526 TOGARAM1Q9Y4F4 1720 aa28.54■■■□□ 2.16
TRAPPC11-203ENST00000504526 PAPPAQ13219 1627 aa28.54■■■□□ 2.16
TRAPPC11-203ENST00000504526 LY75O60449 1722 aa28.53■■■□□ 2.16
TRAPPC11-203ENST00000504526 SMARCC1Q92922 1105 aaPredicted RBP28.53■■■□□ 2.16
TRAPPC11-203ENST00000504526 COL3A1P02461 1466 aaPredicted RBP28.52■■■□□ 2.16
TRAPPC11-203ENST00000504526 C1orf141Q5JVX7 400 aa28.51■■■□□ 2.15
TRAPPC11-203ENST00000504526 DCAF5Q96JK2 942 aa28.51■■■□□ 2.15
TRAPPC11-203ENST00000504526 TMOD3Q9NYL9 352 aa28.51■■■□□ 2.15
TRAPPC11-203ENST00000504526 CCNL1Q9UK58 526 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC11-203ENST00000504526 PIGBQ92521 554 aa28.5■■■□□ 2.15
TRAPPC11-203ENST00000504526 PALLDQ8WX93 1383 aa28.5■■■□□ 2.15
TRAPPC11-203ENST00000504526 ITGB4P16144 1822 aa28.49■■■□□ 2.15
TRAPPC11-203ENST00000504526 PPP2R1AP30153 589 aa28.49■■■□□ 2.15
TRAPPC11-203ENST00000504526 ERVV-2B6SEH9 535 aa28.48■■■□□ 2.15
TRAPPC11-203ENST00000504526 HMOX1P09601 288 aa28.48■■■□□ 2.15
TRAPPC11-203ENST00000504526 SPON1Q9HCB6 807 aa28.48■■■□□ 2.15
TRAPPC11-203ENST00000504526 U2SURPO15042 1029 aaKnown RBP28.46■■■□□ 2.15
TRAPPC11-203ENST00000504526 AKT1S1Q96B36 256 aa28.46■■■□□ 2.15
TRAPPC11-203ENST00000504526 CASZ1Q86V15 1759 aa28.45■■■□□ 2.15
TRAPPC11-203ENST00000504526 ZNF827Q17R98 1081 aa28.45■■■□□ 2.14
TRAPPC11-203ENST00000504526 AKAP4Q5JQC9 854 aa28.44■■■□□ 2.14
TRAPPC11-203ENST00000504526 NUDCQ9Y266 331 aa28.44■■■□□ 2.14
TRAPPC11-203ENST00000504526 KCNQ4P56696 695 aa28.43■■■□□ 2.14
TRAPPC11-203ENST00000504526 SRCAPQ6ZRS2 3230 aa28.43■■■□□ 2.14
TRAPPC11-203ENST00000504526 KDM6AO15550 1401 aaPredicted RBP28.43■■■□□ 2.14
TRAPPC11-203ENST00000504526 CABP4P57796 275 aa28.4■■■□□ 2.14
TRAPPC11-203ENST00000504526 PDGFDQ9GZP0 370 aaPredicted RBP28.4■■■□□ 2.14
TRAPPC11-203ENST00000504526 TFCP2L1Q9NZI6 479 aa28.4■■■□□ 2.14
TRAPPC11-203ENST00000504526 DDX10Q13206 875 aaKnown RBP28.39■■■□□ 2.14
TRAPPC11-203ENST00000504526 MTFR1LQ9H019 292 aa28.38■■■□□ 2.13
TRAPPC11-203ENST00000504526 ASAP1Q9ULH1 1129 aa28.38■■■□□ 2.13
TRAPPC11-203ENST00000504526 LOC102724428A0A0B4J2F2 783 aa28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 ZBTB7AO95365 584 aa28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 SIK1P57059 783 aa28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 MTHFSDQ2M296 383 aaKnown RBP28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 ATG3Q9NT62 314 aa28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 QSER1Q2KHR3 1735 aa28.37■■■□□ 2.13
TRAPPC11-203ENST00000504526 SLC16A10Q8TF71 515 aa28.36■■■□□ 2.13
TRAPPC11-203ENST00000504526 C5P01031 1676 aa28.35■■■□□ 2.13
TRAPPC11-203ENST00000504526 RALBP1Q15311 655 aa28.34■■■□□ 2.13
TRAPPC11-203ENST00000504526 GAS2L2Q8NHY3 880 aa28.34■■■□□ 2.13
TRAPPC11-203ENST00000504526 PPP1R1BQ9UD71 204 aaPredicted RBP28.34■■■□□ 2.13
TRAPPC11-203ENST00000504526 PNPLA7Q6ZV29 1317 aa28.34■■■□□ 2.13
TRAPPC11-203ENST00000504526 U2AF1L5P0DN76 240 aaPredicted RBP28.32■■■□□ 2.12
TRAPPC11-203ENST00000504526 U2AF1Q01081 240 aaKnown RBP eCLIP28.32■■■□□ 2.12
TRAPPC11-203ENST00000504526 ATF5Q9Y2D1 282 aaPredicted RBP28.32■■■□□ 2.12
TRAPPC11-203ENST00000504526 NFATC2IPQ8NCF5 419 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms