RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 MED14O60244 1454 aa17.15■□□□□ 0.34
COL6A4P2-202ENST00000504443 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
COL6A4P2-202ENST00000504443 BRD1O95696 1058 aa17.15■□□□□ 0.34
COL6A4P2-202ENST00000504443 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
COL6A4P2-202ENST00000504443 KIF3BO15066 747 aa17.14■□□□□ 0.33
COL6A4P2-202ENST00000504443 KDM4AO75164 1064 aa17.14■□□□□ 0.33
COL6A4P2-202ENST00000504443 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.33
COL6A4P2-202ENST00000504443 SDSP20132 328 aa17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
COL6A4P2-202ENST00000504443 DTNBO60941 627 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 UVSSAQ2YD98 709 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 PHF14O94880 888 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 GABPB1Q06547 395 aaPredicted RBP17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 TERF2Q15554 542 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
COL6A4P2-202ENST00000504443 CAPN2P17655 700 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 V9GYY5 206 aaPredicted RBP17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 ABCC1P33527 1531 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
COL6A4P2-202ENST00000504443 PTGS1P23219 599 aa17.1■□□□□ 0.33
COL6A4P2-202ENST00000504443 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
COL6A4P2-202ENST00000504443 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
COL6A4P2-202ENST00000504443 GGT6Q6P531 493 aa17.1■□□□□ 0.33
COL6A4P2-202ENST00000504443 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
COL6A4P2-202ENST00000504443 IL16Q14005 1332 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 LRMPQ12912 555 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 TSPOAP1O95153 1857 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
COL6A4P2-202ENST00000504443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.33
COL6A4P2-202ENST00000504443 KIF18AQ8NI77 898 aa17.08■□□□□ 0.33
COL6A4P2-202ENST00000504443 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.33
COL6A4P2-202ENST00000504443 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
COL6A4P2-202ENST00000504443 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
COL6A4P2-202ENST00000504443 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
COL6A4P2-202ENST00000504443 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
COL6A4P2-202ENST00000504443 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
COL6A4P2-202ENST00000504443 VAMP4O75379 141 aa17.07■□□□□ 0.32
COL6A4P2-202ENST00000504443 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
COL6A4P2-202ENST00000504443 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
COL6A4P2-202ENST00000504443 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
COL6A4P2-202ENST00000504443 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
COL6A4P2-202ENST00000504443 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 NPHP1O15259 732 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 MX1P20591 662 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 DNAJC2Q99543 621 aaKnown RBP17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 DCTPP1Q9H773 170 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 TNNT1P13805 278 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
COL6A4P2-202ENST00000504443 ABCC4O15439 1325 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
COL6A4P2-202ENST00000504443 FIBPO43427 364 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 REC8O95072 547 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 KRT222Q8N1A0 295 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 ERC2O15083 957 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
COL6A4P2-202ENST00000504443 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.31
COL6A4P2-202ENST00000504443 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.31
COL6A4P2-202ENST00000504443 CCDC112Q8NEF3 446 aa17.02■□□□□ 0.31
COL6A4P2-202ENST00000504443 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.31
COL6A4P2-202ENST00000504443 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.31
COL6A4P2-202ENST00000504443 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 DRC7Q8IY82 874 aa17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 TCHHQ07283 1943 aa17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 MYOM2P54296 1465 aa17.01■□□□□ 0.31
COL6A4P2-202ENST00000504443 FBLN1P23142 703 aa17■□□□□ 0.31
COL6A4P2-202ENST00000504443 CUL4AQ13619 759 aa17■□□□□ 0.31
COL6A4P2-202ENST00000504443 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
COL6A4P2-202ENST00000504443 USP32Q8NFA0 1604 aa17■□□□□ 0.31
COL6A4P2-202ENST00000504443 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms