RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
PDLIM7-211ENST00000504318 USHBP1Q8N6Y0 703 aa19.4■□□□□ 0.7
PDLIM7-211ENST00000504318 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
PDLIM7-211ENST00000504318 TXNRD1Q16881 649 aa19.39■□□□□ 0.69
PDLIM7-211ENST00000504318 SMG6Q86US8 1419 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-211ENST00000504318 LY75O60449 1722 aa19.38■□□□□ 0.69
PDLIM7-211ENST00000504318 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
PDLIM7-211ENST00000504318 PANK3Q9H999 370 aa19.38■□□□□ 0.69
PDLIM7-211ENST00000504318 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
PDLIM7-211ENST00000504318 NBPF14Q5TI25 921 aa19.37■□□□□ 0.69
PDLIM7-211ENST00000504318 TOGARAM1Q9Y4F4 1720 aa19.37■□□□□ 0.69
PDLIM7-211ENST00000504318 ZCRB1Q8TBF4 217 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-211ENST00000504318 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-211ENST00000504318 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-211ENST00000504318 KIF7Q2M1P5 1343 aa19.34■□□□□ 0.69
PDLIM7-211ENST00000504318 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
PDLIM7-211ENST00000504318 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
PDLIM7-211ENST00000504318 TUBGCP6Q96RT7 1819 aa19.32■□□□□ 0.68
PDLIM7-211ENST00000504318 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
PDLIM7-211ENST00000504318 ITGB4P16144 1822 aa19.31■□□□□ 0.68
PDLIM7-211ENST00000504318 CYP27B1O15528 508 aa19.31■□□□□ 0.68
PDLIM7-211ENST00000504318 SLC15A2Q16348 729 aa19.31■□□□□ 0.68
PDLIM7-211ENST00000504318 EYA1Q99502 592 aa19.31■□□□□ 0.68
PDLIM7-211ENST00000504318 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-211ENST00000504318 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-211ENST00000504318 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-211ENST00000504318 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-211ENST00000504318 RAPGEF4Q8WZA2 1011 aa19.29■□□□□ 0.68
PDLIM7-211ENST00000504318 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
PDLIM7-211ENST00000504318 PCDH11XQ9BZA7 1347 aa19.28■□□□□ 0.68
PDLIM7-211ENST00000504318 PCDH11YQ9BZA8 1340 aa19.28■□□□□ 0.68
PDLIM7-211ENST00000504318 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-211ENST00000504318 ZNF827Q17R98 1081 aa19.28■□□□□ 0.68
PDLIM7-211ENST00000504318 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-211ENST00000504318 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
PDLIM7-211ENST00000504318 PTGER2P43116 358 aa19.26■□□□□ 0.67
PDLIM7-211ENST00000504318 TNNT2P45379 298 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-211ENST00000504318 AKT1S1Q96B36 256 aa19.26■□□□□ 0.67
PDLIM7-211ENST00000504318 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
PDLIM7-211ENST00000504318 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-211ENST00000504318 SGIP1Q9BQI5 828 aa19.25■□□□□ 0.67
PDLIM7-211ENST00000504318 SPON1Q9HCB6 807 aa19.25■□□□□ 0.67
PDLIM7-211ENST00000504318 STK32BQ9NY57 414 aa19.25■□□□□ 0.67
PDLIM7-211ENST00000504318 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
PDLIM7-211ENST00000504318 SLC27A3Q5K4L6 730 aa19.24■□□□□ 0.67
PDLIM7-211ENST00000504318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM7-211ENST00000504318 KCNQ4P56696 695 aa19.22■□□□□ 0.67
PDLIM7-211ENST00000504318 C5P01031 1676 aa19.21■□□□□ 0.67
PDLIM7-211ENST00000504318 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-211ENST00000504318 ZBTB7AO95365 584 aa19.2■□□□□ 0.66
PDLIM7-211ENST00000504318 KNSTRNQ9Y448 316 aa19.2■□□□□ 0.66
PDLIM7-211ENST00000504318 MORC1Q86VD1 984 aa19.19■□□□□ 0.66
PDLIM7-211ENST00000504318 PNPLA7Q6ZV29 1317 aa19.19■□□□□ 0.66
PDLIM7-211ENST00000504318 KDRP35968 1356 aa19.19■□□□□ 0.66
PDLIM7-211ENST00000504318 PHKG2P15735 406 aa19.17■□□□□ 0.66
PDLIM7-211ENST00000504318 IL13P35225 146 aa19.17■□□□□ 0.66
PDLIM7-211ENST00000504318 MTFR1LQ9H019 292 aa19.17■□□□□ 0.66
PDLIM7-211ENST00000504318 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
PDLIM7-211ENST00000504318 PIGBQ92521 554 aa19.16■□□□□ 0.66
PDLIM7-211ENST00000504318 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
PDLIM7-211ENST00000504318 PALLDQ8WX93 1383 aa19.16■□□□□ 0.66
PDLIM7-211ENST00000504318 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
PDLIM7-211ENST00000504318 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-211ENST00000504318 ATF5Q9Y2D1 282 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-211ENST00000504318 KDM6AO15550 1401 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-211ENST00000504318 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-211ENST00000504318 MPRIPQ6WCQ1 1025 aa19.14■□□□□ 0.65
PDLIM7-211ENST00000504318 C4BP0C0L5 1744 aa19.14■□□□□ 0.65
PDLIM7-211ENST00000504318 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.65
PDLIM7-211ENST00000504318 IFNL2Q8IZJ0 200 aa19.13■□□□□ 0.65
PDLIM7-211ENST00000504318 ZNF831Q5JPB2 1677 aa19.11■□□□□ 0.65
PDLIM7-211ENST00000504318 MTHFSP49914 203 aa19.1■□□□□ 0.65
PDLIM7-211ENST00000504318 AMIGO3Q86WK7 504 aa19.1■□□□□ 0.65
PDLIM7-211ENST00000504318 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
PDLIM7-211ENST00000504318 MAP3K5Q99683 1374 aa19.09■□□□□ 0.65
PDLIM7-211ENST00000504318 SLC16A10Q8TF71 515 aa19.09■□□□□ 0.65
PDLIM7-211ENST00000504318 UTRNP46939 3433 aa19.09■□□□□ 0.65
PDLIM7-211ENST00000504318 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.65
PDLIM7-211ENST00000504318 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
PDLIM7-211ENST00000504318 TFCP2L1Q9NZI6 479 aa19.08■□□□□ 0.64
PDLIM7-211ENST00000504318 PPP1R1BQ9UD71 204 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-211ENST00000504318 ASAP1Q9ULH1 1129 aa19.08■□□□□ 0.64
PDLIM7-211ENST00000504318 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.64
PDLIM7-211ENST00000504318 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
PDLIM7-211ENST00000504318 COL23A1Q86Y22 540 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-211ENST00000504318 SMARCC1Q92922 1105 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-211ENST00000504318 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-211ENST00000504318 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-211ENST00000504318 SLC4A9Q96Q91 983 aa19.06■□□□□ 0.64
PDLIM7-211ENST00000504318 SYT17Q9BSW7 474 aa19.06■□□□□ 0.64
PDLIM7-211ENST00000504318 ATG3Q9NT62 314 aa19.06■□□□□ 0.64
PDLIM7-211ENST00000504318 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-211ENST00000504318 LOC102724428A0A0B4J2F2 783 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 ERVV-2B6SEH9 535 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 SIK1P57059 783 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 ITPK1Q13572 414 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 AMOTQ4VCS5 1084 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 PLEKHO1Q53GL0 409 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 LINC00116Q8NCU8 138 aa19.05■□□□□ 0.64
PDLIM7-211ENST00000504318 DCAF5Q96JK2 942 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms