RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 CWC27Q6UX04 472 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 CTNNA3Q9UI47 895 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 K7ELQ4 463 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 KCNH5Q8NCM2 988 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 AKNAQ7Z591 1439 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 TMOD3Q9NYL9 352 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 JAKMIP1Q96N16 626 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 WDR33Q9C0J8 1336 aaKnown RBP8.48□□□□□ -1.05
SYNPO2-205ENST00000504178 PIBF1Q8WXW3 757 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 ERLIN2O94905 339 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 ZNF652Q9Y2D9 606 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 CCDC192P0DO97 292 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 NBPF8Q3BBV2 869 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 LARP1BQ659C4 914 aaKnown RBP8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 POLA1P09884 1462 aaPredicted RBP8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 CCDC141Q6ZP82 1450 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 FCHSD2O94868 740 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 BLOC1S2Q6QNY1 142 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 TXLNBQ8N3L3 684 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 WASF1Q92558 559 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 SEPT11Q9NVA2 429 aaKnown RBP8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 ZPR1O75312 459 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 USP5P45974 858 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
SYNPO2-205ENST00000504178 IMMTQ16891 758 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 METTL24Q5JXM2 366 aa8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 ZSCAN31Q96LW9 406 aaPredicted RBP8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 LUC7LQ9NQ29 371 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 TMOD2Q9NZR1 351 aa8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 IDH1O75874 414 aaKnown RBP8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 SSBP05455 408 aaKnown RBP eCLIP8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 CCDC181Q5TID7 509 aa8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.05
SYNPO2-205ENST00000504178 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 KRT85P78386 507 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 IL1RAPL2Q9NP60 686 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 ARHGEF11O15085 1522 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 IQGAP2Q13576 1575 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 MYD88Q99836 296 aa8.46□□□□□ -1.06
SYNPO2-205ENST00000504178 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 KRT32Q14532 448 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 DHX8Q14562 1220 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 MAP7D2Q96T17 732 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 AKAP2Q9Y2D5 859 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 HMGXB3Q12766 1538 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 CAVIN4Q5BKX8 364 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
SYNPO2-205ENST00000504178 PTPN23Q9H3S7 1636 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 MCM10Q7L590 875 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 SEC63Q9UGP8 760 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 NEFHP12036 1026 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 CWC15Q9P013 229 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 CASTP20810 708 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 IBSPP21815 317 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 TMPOP42166 694 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 ABCF2Q9UG63 623 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 CUL7Q14999 1698 aa8.44□□□□□ -1.06
SYNPO2-205ENST00000504178 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 DESP17661 470 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 TNIP1Q15025 636 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 AXDND1Q5T1B0 1012 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 ZNF287Q9HBT7 754 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 CFAP45Q9UL16 551 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 NEBLO76041 1014 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 ZRSR2Q15696 482 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 RPAP2Q8IXW5 612 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 TMEM57Q8N5G2 664 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 CD109Q6YHK3 1445 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 CCDC191Q8NCU4 936 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 ANKRD62A6NC57 917 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 H0YHG0 523 aa8.43□□□□□ -1.06
SYNPO2-205ENST00000504178 ADGRL1O94910 1474 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 IFIT1P09914 478 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms